CI01000020_06769551_06772924


Basic Information

Item Value
gene id CI01000020_06769551_06772924
gene name NA
gene type misc
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000020
NCBI id null
chromosome length 7209782
location 6769310 ~ 6774074 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000020_06769551_06772924.mRNA
GTATAAATGGGTTGCTCTTTTACAGTTATGCTTTCCCACTTTTTAAGATCATTTGGAAATAAAAGTACAAAAATGCAGGGATCTTTACAAATCACAAAGCTTAAAATTGCCACCGTCTTGGCATGCACCTGCCATGAGCTGCTAACTGCTGCTTGCTAATTCTAAGAGCAAGACCTGAATTAGTGGCCTGTGCAAAAACCAAAAGCCTCAGTGTTCAGTGTGATAATCAAACAGAGGGCAGATGGCCTCAGCCATTACAGCAAAACCGAAGTTGGACTTCATGGCAAGACTCCATCAGCTAAGAGAGGAAGGCCCCATCTCTCCAGATGTGCGTCCAAACACTGACCACGGCGTCTCCATCGACCGCACCATTCTGTGGAGGGCCATCCTCTCTAGACCACCACCTCCAGACCCACTCTACGCAGGTCAGCCAACAGCAGGAGAGCCCAGCGAAACGGGTGAAATCCCCAAGAAGAGAGGTCGTCGTAACGTGCATTCACGAGGCCACCACAACCATCACCACGCCCAGCTGATGCGCGTCGGATGCGTCCTCGGTACCTGCCAGGGTGTCCAGGCCAAACTTTTAGAAAGCATTAGGTTTTCCCACTATGTGTTGTATGTTATAGGACAACTTGCTTTCAAATCACTCCAGAAAGGCAGAGAACCGACCAAAAAACCTGAATTTACTTGATACCTTTCTGTGCATTCAGTCTATACTGTTATAATCTTTACATAGGCTTGAATTTCAATTGGATTTGATGGTGTTGATAACTGTAAAAGTCTTTCTCTTTGTCATGGTTGATTCTAACGATGATGATCATAGGAAATAGTAATAATCGCTGGTGCTTTGGCGCTAATCTGCTCAAAGGCTCTCTATATATCCGACACCATTCTCTCTGCTGTAATCGATTAATGTCTCGTGACTGATCA

Function

NR:

description
TPA_exp: intermedin precursor

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000020_06769551_06772924.mRNA False 930 mRNA 0.45 3 6769310 6773163

Neighbor

gene id symbol gene type direction distance location
CI01000020_06652576_06656275 NA coding upstream 112339 6652576 ~ 6656971 (+)
CI01000020_06272024_06286697 NA coding upstream 482354 6272024 ~ 6286956 (+)
CI01000020_06122192_06132967 PPFIBP1A coding upstream 635667 6122192 ~ 6133643 (+)
CI01000020_06035989_06042016 TMTC2A coding upstream 727290 6035989 ~ 6042020 (+)
CI01000020_06000788_06005009 NA coding upstream 764174 6000727 ~ 6005136 (+)
CI01000020_06784747_06793255 NA coding downstream 11308 6784471 ~ 6794581 (+)
CI01000020_06795794_06800988 GLT8D2 coding downstream 22631 6795794 ~ 6801095 (+)
CI01000020_06809322_06816591 NA coding downstream 36159 6809322 ~ 6816591 (+)
CI01000020_06819838_06824266 PARP12B coding downstream 46675 6819838 ~ 6824669 (+)
CI01000020_06833378_06846518 NA coding downstream 60179 6833342 ~ 6846776 (+)
G114494 NA non-coding upstream 9476 6759601 ~ 6759834 (+)
G114491 NA non-coding upstream 13177 6755872 ~ 6756133 (+)
G114478 NA non-coding upstream 88289 6680473 ~ 6681021 (+)
G114440 NA non-coding upstream 119746 6648227 ~ 6649564 (+)
G114464 NA non-coding upstream 121734 6647124 ~ 6647576 (+)
G114499 NA non-coding downstream 5616 6778779 ~ 6778981 (+)
G114500 NA non-coding downstream 5836 6778999 ~ 6779514 (+)
G114501 NA non-coding downstream 6555 6779718 ~ 6779923 (+)
G114505 NA non-coding downstream 37484 6810647 ~ 6810919 (+)
G114436 NA non-coding downstream 140291 6913454 ~ 6914288 (+)
G114388 NA other upstream 124494 6617328 ~ 6644816 (+)
G114389 NA other upstream 169130 6598346 ~ 6600180 (+)
G114382 NA other upstream 175746 6592224 ~ 6593564 (+)
CI01000020_05960777_05981596 NA other upstream 788062 5960777 ~ 5982298 (+)
G114094 NA other upstream 963592 5803052 ~ 5805718 (+)
G114413 NA other downstream 30385 6803548 ~ 6808718 (+)

Expression


Co-expression Network