Gene
RNA
| Item | Value |
|---|---|
| gene id | CI01000020_06860988_06887829 |
| gene name | MICAL3B |
| gene type | coding |
| species | grasscarp (Ctenopharyngodon idella) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | CI01000020 |
| NCBI id | null |
| chromosome length | 7209782 |
| location | 6860988 ~ 6888034 (+) |
| genome version | v1_2015/06_NatureGenetics_grasscarp_Genome |
| symbol | description |
|---|---|
| mical3b | Predicted to enable FAD binding activity; actin binding activity; and oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen. Predicted to be involved in actin filament depolymerization. Predicted to act upstream of or within exocytosis. Predicted to be located in nucleus. Is expressed in floor plate; hindbrain nucleus; octaval nerve motor nucleus; octaval nerve sensory nucleus; and spinal cord. Orthologous to human MICAL3 (microtubule associated monooxygenase, calponin and LIM domain containing 3). |
| id | name | namespace |
|---|---|---|
| GO:0071949 | FAD binding | molecular_function |
| id | description |
|---|---|
| K19947 | MICAL; F-actin monooxygenase |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| CI01000020_06860988_06887829.mRNA | True | 5522 | mRNA | 0.53 | 32 | 6860988 | 6888034 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| CI01000020_06852155_06857778 | SVOPL | coding | upstream | 3203 | 6852155 ~ 6857785 (+) |
| CI01000020_06833378_06846518 | NA | coding | upstream | 14212 | 6833342 ~ 6846776 (+) |
| CI01000020_06819838_06824266 | PARP12B | coding | upstream | 36319 | 6819838 ~ 6824669 (+) |
| CI01000020_06809322_06816591 | NA | coding | upstream | 44397 | 6809322 ~ 6816591 (+) |
| CI01000020_06795794_06800988 | GLT8D2 | coding | upstream | 59893 | 6795794 ~ 6801095 (+) |
| CI01000020_06906111_06910886 | TSPAN9A, TSPAN9B, TSPAN9, TSN9 | coding | downstream | 18077 | 6906111 ~ 6910979 (+) |
| CI01000020_06927376_06933108 | DMTF1 | coding | downstream | 38656 | 6926690 ~ 6933416 (+) |
| CI01000020_06944393_06947480 | ARL1 | coding | downstream | 56290 | 6944324 ~ 6947480 (+) |
| CI01000020_06992285_07002537 | NA | coding | downstream | 104251 | 6992285 ~ 7002547 (+) |
| CI01000020_07014667_07020555 | FOXM1 | coding | downstream | 126633 | 7014667 ~ 7020990 (+) |
| G114505 | NA | non-coding | upstream | 50069 | 6810647 ~ 6810919 (+) |
| G114501 | NA | non-coding | upstream | 81065 | 6779718 ~ 6779923 (+) |
| G114500 | NA | non-coding | upstream | 81474 | 6778999 ~ 6779514 (+) |
| G114499 | NA | non-coding | upstream | 82007 | 6778779 ~ 6778981 (+) |
| G114494 | NA | non-coding | upstream | 101154 | 6759601 ~ 6759834 (+) |
| G114436 | NA | non-coding | downstream | 25420 | 6913454 ~ 6914288 (+) |
| G114427 | NA | non-coding | downstream | 50879 | 6938913 ~ 6940153 (+) |
| G114532 | NA | non-coding | downstream | 189145 | 7077179 ~ 7079432 (+) |
| G114540 | NA | non-coding | downstream | 191554 | 7079588 ~ 7080932 (+) |
| CI01000020_07089227_07093896 | NA | non-coding | downstream | 193380 | 7081414 ~ 7093978 (+) |
| G114413 | NA | other | upstream | 52270 | 6803548 ~ 6808718 (+) |
| CI01000020_06769551_06772924 | NA | other | upstream | 86914 | 6769310 ~ 6774074 (+) |
| G114388 | NA | other | upstream | 216172 | 6617328 ~ 6644816 (+) |
| G114389 | NA | other | upstream | 260808 | 6598346 ~ 6600180 (+) |
| G114382 | NA | other | upstream | 267424 | 6592224 ~ 6593564 (+) |
| species | gene id | symbol | gene type | chromosome | NCBI id | location |
|---|
