CI01000020_06992285_07002537


Basic Information

Item Value
gene id CI01000020_06992285_07002537
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000020
NCBI id null
chromosome length 7209782
location 6992285 ~ 7002547 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000020_06992285_07002537.mRNA
TATCTGGAGATGCGTTACAATAAAGTAATTCGACTTTTTGGGACAGTCCTGTTTATCATACAGACAGTATTGTACACTGGTCTGGTTATTTACGCTCCAGCTTTGGCTTTAAACCAAGTCACAGGTGTGGATCTCTGGGGTGCCGTCATGTCAACTGGAGTCGTCTGCACTCTCTACTGTACATTAGGCGGTCTGAAGGCAGTGGTGTGGACAGACGTGTTCCAGGTTGGCATCATCTTGGCTGGTCTTTTGGCTGTCATCATCCAATCAGTGATTCTCCAGGGCGGGATCTCCACTATCATCAGTGACTCCTCCCAGGGCGGCCGACTCAACCTATGGGACTTCGATCCAAACCCTCTGAGGAGACACACATTCTGGAGCATCACAGTGGGAGGGACGTTCCTCTGGACCAGCGTATATGGCATTAATCAAGCTCAGGTGCAGAGATACATATCATGCAAGTCCCTGTTCCATGCTAAAATGGCTTTGTATATTAACTTAGTGTCTCTCTGGGCTATTTCATTATGCTCAGTATTTTGCGGCTTGTGTTTATACTCCATTTATAAGAACTGTGATCCATGGACAGCAAAGAAGGTGTCTGCTCAAGACCAGTACAGTCTCCTCCAGTGTAAATGCTTTGGCTGCGGTAACTATTACAGATCTGATGCGCCCGTACCTCAGTCTGTCAGAGAGGCAGCTGTCCTGGGCTTCAAAGGGCATGAATATTATTTCCCAATCACAGGTGTGTTTTATGGTGCCGTTTGCATTGGAATGGCTGGTCTTGCATCTTTGATGGGAGGGATGCTACAGGCTGCTATTAGCATCGTAGGAGTGGTTGGCGGACCTCTACTGGGCCTCTTTTCTCTTGGCATCCTGTTTCCATGCGCCAACACAAAGGGAGGTTTGGCAGGGCTACTGTCTGGTTTGGTGCTGTCACTGTGGGTGTGCATTGGAGCACAGATATACCCTCCGCAACCAGAGAACAGCAGACCGTTGCCTCTGACGACACATGGCTGTAACTTCTCAATGGCACCAGACGGCACTAACTGGACTACAAACATGGACCACCTCACAATGAAAGAGGAGAATCAACAAAGGCCTTTCCTAGCTGATAATTGGTACTCACTCTCATACCTGTACTTCGGCCCATTGGGGACTGTGACGGTCATCGCCGTAGGGCTTATTATCAGCATTCTTTCGGGGGGCAGACAGATGAAACTGCAGCCTGGACTCACGCTATCAAAAGAGGACCTCACCTGCTATAAAGTCTACAATGTACTCAAAGAAAAAGTTTCCAGTAGGTCGGGTAATCTTGACCTGGTGCAGGAGCTGGAGAAATCCTTTGGAAAAACTAACTTTGCTTTCTGTGAAGTAGAGTTATCTACTCAAACACCATTAAACTGAAGGTCTTTAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000020_06992285_07002537.mRNA True 1414 mRNA 0.48 13 6992285 7002547

Neighbor

gene id symbol gene type direction distance location
CI01000020_06944393_06947480 ARL1 coding upstream 44805 6944324 ~ 6947480 (+)
CI01000020_06927376_06933108 DMTF1 coding upstream 58869 6926690 ~ 6933416 (+)
CI01000020_06906111_06910886 TSPAN9A, TSPAN9B, TSPAN9, TSN9 coding upstream 81306 6906111 ~ 6910979 (+)
CI01000020_06860988_06887829 MICAL3B coding upstream 104251 6860988 ~ 6888034 (+)
CI01000020_06852155_06857778 SVOPL coding upstream 134500 6852155 ~ 6857785 (+)
CI01000020_07014667_07020555 FOXM1 coding downstream 12120 7014667 ~ 7020990 (+)
CI01000020_07029337_07034375 PGM3 coding downstream 26790 7029337 ~ 7034438 (+)
CI01000020_07043558_07046909 CCNC coding downstream 41011 7043558 ~ 7046909 (+)
CI01000020_07050004_07055580 FAXCA coding downstream 46847 7049394 ~ 7055828 (+)
CI01000020_07089227_07093896 NA coding downstream 86680 7081414 ~ 7093978 (+)
G114427 NA non-coding upstream 52132 6938913 ~ 6940153 (+)
G114436 NA non-coding upstream 77997 6913454 ~ 6914288 (+)
G114505 NA non-coding upstream 181366 6810647 ~ 6810919 (+)
G114501 NA non-coding upstream 212362 6779718 ~ 6779923 (+)
G114500 NA non-coding upstream 212771 6778999 ~ 6779514 (+)
G114532 NA non-coding downstream 74632 7077179 ~ 7079432 (+)
G114540 NA non-coding downstream 77041 7079588 ~ 7080932 (+)
G114541 NA non-coding downstream 87660 7090207 ~ 7090476 (+)
CI01000020_07097679_07107859 NA non-coding downstream 100641 7097679 ~ 7109571 (+)
G114413 NA other upstream 183567 6803548 ~ 6808718 (+)
CI01000020_06769551_06772924 NA other upstream 218211 6769310 ~ 6774074 (+)
G114388 NA other upstream 347469 6617328 ~ 6644816 (+)
G114389 NA other upstream 392105 6598346 ~ 6600180 (+)
G114382 NA other upstream 398721 6592224 ~ 6593564 (+)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location