CI01000020_07014667_07020555 (FOXM1)


Basic Information

Item Value
gene id CI01000020_07014667_07020555
gene name FOXM1
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000020
NCBI id null
chromosome length 7209782
location 7014667 ~ 7020990 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000020_07014667_07020555.mRNA
ATGAGAGAGAGCCCGAGGAGACCCATCATCCTGAAGAGGAGGAAGCTGCCATTTCAGAAGAGTGAATCTGATGTAGGTTGTGATGAGGCGGACGGGCCGCGCTCCCAGACCACCCTGACCCCGACCCCATCCACCGCCCGCTGCTTCCCCGATGGCATCCGTGTCATGGACCACCCCACCATGCCGGACACACAGGTGGTGGTGATACCGAAAGCAGCTGATCTGCAGAGTGTCATCAGCGCCTTGACGGCCAAAGGGAAGGAGTGCGGCCCTCAGGGCCGAAACAAGTTCATCCTGCTTAGTGGCAGCACCAGTTTAGAGGAGAGCAAAACCCTTGGGTGTTTTTCTACAGAACCTGGGGCTGATCTTGGGAAAGTAGTGAAAAAGGAGACTGAGTGCTACCCACTTGATGACAGTCTGACGAACATCCAGTGGCTGGGAAAAATGAGCTCTGATGGACTCGGACCAGAGTCGAACCAAAAATGCCCCAGCAAGGACAATCCAAGTGATTGTAATCAGCAGCCCAAAGGTCCAGAAAAGGAGAAGGACCCTCAGTCTGAGAGACCCCCATATTCCTACATGGCAATGATCCAGTTTGCTATCAACAGCAAAAATAATAGACACATGACCCTGAAGGAAATTTACAATTGGATCGAAGACCATTTTCCGTACTTCAGAAATGTCGCAAAACCCGGATGGAAGAATTCCATACGTCATAATCTCTCACTGCATGACATGTTTGTCCGTGAGACATCTCCTGATGGCAAGATCTCCTACTGGACGATTCGACCGGAAGCAAACCGCTGTCTTACTTTGGACCAGGTCTACAAGCCTTTGGTTGACCCAGTGACCCCCACTTGCCCTCAGATCACACAAGTTGGTAATCATCAACAACAGAAAAGAGGTCCTCCGGAGGTGAAGAAAACAATACCTGCCGCAGGTGGCACAGAGAGGAAGATGAAGCCTCTTCTGCCTCGGACTGACTCATACCTGGTTCCCATCCAGCTTCCTCTGGGTCAGTCACTCTTCCTGCCCTCGTCCAGTCCCATGTCTCTTGCCACTCCTCCGCACACTCAAAGCACTTCCACTCCCAGCTCTAGCAGTGTGAACAAGAGGGTCCGGATTGCTCCTAAGGTCTCGCAGAGTGACGTAAGCTCGGTGATGCTGTGTAATCCTGCCTCTCAGGAGATAAAGGAGGAGCCTGTGTGTGTGTCTCTGACTCCTGAGGCGTCCGAAGCCCCTCCCCCCAAAACCAGACGACGAGAAAACAGCAGCTCTCGCCGCAAACAGCGCCTGGTCCTGCCAGCCACCGAGGAACCTGTCCTGCTCTACCCCGACAGCACTCTTTTCGACTCGGGCGTGGTCTCCGACGTCTCCACCTTCCAAGACACTCGGGAGGCGGAGCCTGATCCAGAGCCCCTGCCCTCCTGTAAACCGGACTTGGACAGCCCGAATAGAGAATACACTTTTAAAACACCCATCAAGAGCAGCCACCCTTCCTCATCTACTCCCAGCAAACCACCCACAGTGCTGGAGCCCTGGAGGATCACTCCCGTCGGGAAGGGAGGCGTGCTGGACTTCAGCCCCATCCGAACGCCCAGTGGGCCACAGCTCACCCCACAACGGCATGAACACACGCCTTTCAGTTTCAACAGCACACCCTTCAAGGAGCTGCCACTTTTCAACTCCCCCCGAGAGCTTCTCACCTGTGCACGACGCTCTCCGAGACGCTCCACTCCGGCCTGCTCAAGAGAGCTGCTGCAGGTGGGCGTCGCCAACCGCTCTCTCACAGAAGGGCTCGTCCTGGACACCATGAACGACAGCTTGAGTAAAATTCTAGTGGATATCAGCTTCTCCGGCCTGGAGGATGATGATCTCAGCATGGGGAACATCAGCTGGTCCCAGTTTATCCCGGAGCTGAAGTGACTCCTGACTCCCTTTATCTGAGCTGCTCAACTTTCTTCACTGCCTTTGATTCTTATTGATCTATTCTATTTTTATAAGTATTTTCTTAATTTCTCTGCTGACAAGTGTCGCTATTTCACTGCCTTTTACTGTACGTGTTTGTGTTTTGGATGTGTAGGCCTTTATTGCTTTATTTGCGAGCAAAACTGTTAGTGACGAATGTACTTAGATATAATTAATTTGCACAAGTTGTAATATATAAATGTGGGTGTGTGAGAGAGTGTGTGTATTATAAGTAAGTGGACATACAGATTTAACAGATTAATTAATTTACACTACCCAACTTTACAGTATTTCTTTGTTTTGGAATGATTTTGAACACCTTGGTATAGCCAGATGGACTGATGGTAAAAATTACACACAAAAGGAGATTTTTATGAGAATTTGGGGTGTAAA

Function

symbol description
foxm1 Predicted to enable DNA-binding transcription factor activity and RNA polymerase II transcription regulatory region sequence-specific DNA binding activity. Predicted to be involved in regulation of cell population proliferation and regulation of transcription by RNA polymerase II. Predicted to act upstream of or within G2/M transition of mitotic cell cycle and regulation of transcription, DNA-templated. Predicted to be active in nucleus. Orthologous to human FOXM1 (forkhead box M1).

GO:

id name namespace
GO:0043565 sequence-specific DNA binding molecular_function

KEGG:

id description
K09406 FOXM; forkhead box protein M

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000020_07014667_07020555.mRNA True 2361 mRNA 0.51 8 7014667 7020990

Neighbor

gene id symbol gene type direction distance location
CI01000020_06992285_07002537 NA coding upstream 12120 6992285 ~ 7002547 (+)
CI01000020_06944393_06947480 ARL1 coding upstream 67187 6944324 ~ 6947480 (+)
CI01000020_06927376_06933108 DMTF1 coding upstream 81251 6926690 ~ 6933416 (+)
CI01000020_06906111_06910886 TSPAN9A, TSPAN9B, TSPAN9, TSN9 coding upstream 103688 6906111 ~ 6910979 (+)
CI01000020_06860988_06887829 MICAL3B coding upstream 126633 6860988 ~ 6888034 (+)
CI01000020_07029337_07034375 PGM3 coding downstream 8347 7029337 ~ 7034438 (+)
CI01000020_07043558_07046909 CCNC coding downstream 22568 7043558 ~ 7046909 (+)
CI01000020_07050004_07055580 FAXCA coding downstream 28404 7049394 ~ 7055828 (+)
CI01000020_07089227_07093896 NA coding downstream 68237 7081414 ~ 7093978 (+)
CI01000020_07097679_07107859 NA coding downstream 76689 7097679 ~ 7109571 (+)
G114427 NA non-coding upstream 74514 6938913 ~ 6940153 (+)
G114436 NA non-coding upstream 100379 6913454 ~ 6914288 (+)
G114505 NA non-coding upstream 203748 6810647 ~ 6810919 (+)
G114501 NA non-coding upstream 234744 6779718 ~ 6779923 (+)
G114500 NA non-coding upstream 235153 6778999 ~ 6779514 (+)
G114532 NA non-coding downstream 56189 7077179 ~ 7079432 (+)
G114540 NA non-coding downstream 58598 7079588 ~ 7080932 (+)
G114541 NA non-coding downstream 69217 7090207 ~ 7090476 (+)
G114413 NA other upstream 205949 6803548 ~ 6808718 (+)
CI01000020_06769551_06772924 NA other upstream 240593 6769310 ~ 6774074 (+)
G114388 NA other upstream 369851 6617328 ~ 6644816 (+)
G114389 NA other upstream 414487 6598346 ~ 6600180 (+)
G114382 NA other upstream 421103 6592224 ~ 6593564 (+)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location