G110581


Basic Information

Item Value
gene id G110581
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000020
NCBI id null
chromosome length 7209782
location 119161 ~ 137052 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU125662
TTTTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGAAATTCTGTTAAATTTACGGTAAAAAAAAAACTGCAGCTTTTGTTGCCAGAAATTTACCAGAAAAAATATGGTAGCAACAATTTAGGTTTTACGGATTTGACACAAGCTTTTCCACAAGCTGAGAAGGACAATACTAATACATAGAAGGTGCACAGTGTCATTCACACAAACACTAAACACTATCATGCTAACACACAACATTTAAAAAAATGCAATAAACATTAATTTAACAACATTAGATGTAACATAAAACCTTAATGTACATAACTGATAAGAAAAAACTAAGAAAATACATCAAATGTGAAATGTCATGCAGGGAATTCTGTAAAAGTCCATTTAGTTTTTTTTTTTGTTGGTTTTTTTTTAATTATTCAATGACTTGTTCTTTTTCAC

Function

NR:

description
PREDICTED: cyclic AMP-responsive element-binding protein 5-like isoform X2

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU125662 True 435 lncRNA 0.26 2 119161 137052

Neighbor

gene id symbol gene type direction distance location
CI01000020_00108833_00112799 NA coding upstream 5734 108833 ~ 113427 (+)
CI01000020_00250359_00289375 SND1 coding downstream 113307 250359 ~ 289375 (+)
CI01000020_00466505_00489442 NA coding downstream 329224 466276 ~ 489664 (+)
CI01000020_00501322_00502978 LEPB coding downstream 364138 501190 ~ 503119 (+)
CI01000020_00536611_00538626 NA coding downstream 397882 534934 ~ 538982 (+)
CI01000020_00603718_00606833 NA coding downstream 466534 603586 ~ 607523 (+)
G110552 NA non-coding upstream 18097 98210 ~ 101064 (+)
G110554 NA non-coding upstream 21115 96363 ~ 98046 (+)
G110539 NA non-coding upstream 23903 94749 ~ 95258 (+)
G110538 NA non-coding upstream 25712 57204 ~ 93449 (+)
G110609 NA non-coding downstream 177219 314271 ~ 314519 (+)
G110615 NA non-coding downstream 186014 323066 ~ 323265 (+)
G110616 NA non-coding downstream 187412 324464 ~ 324703 (+)
G110617 NA non-coding downstream 187883 324935 ~ 325154 (+)
G110619 NA non-coding downstream 191345 328397 ~ 328731 (+)
G110562 NA other upstream 71121 30693 ~ 48040 (+)
G110589 NA other downstream 43726 180778 ~ 226848 (+)
CI01000020_00810993_00815495 CDPF1 other downstream 673847 810899 ~ 816510 (+)
CI01000020_01083614_01106789 PLXNC1 other downstream 931004 1083230 ~ 1107257 (+)
CI01000020_01375811_01378288 AVPR2L other downstream 1239317 1373164 ~ 1379068 (+)
CI01000020_02444149_02444833 NA other downstream 2307192 2443278 ~ 2444944 (+)

Expression


Co-expression Network