G110609


Basic Information

Item Value
gene id G110609
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000020
NCBI id null
chromosome length 7209782
location 314271 ~ 314519 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU125692
AGAGAGTCTGTCTTGTTTCACGTCGTTTCTATGCCTAATCATACACAGAATGGCTGTGGGGCTGTCTAACAAGATGATCCATTTGTCTTCATTGCAGATGTTGATAGTTCCTCTGTGTGTTGAGGGTGGGCGCCTTCACAGTAGTCTCCCAGGATATCCTGTTAATGTGTGAATGAGTTTCCCAGTAGACCTGTGTACTTGAAACCTATTCTCTTTTTATCCTCATCTCCATCTCTTCCTGTTGCACAC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU125692 True 249 lncRNA 0.44 1 314271 314519

Neighbor

gene id symbol gene type direction distance location
CI01000020_00250359_00289375 SND1 coding upstream 24896 250359 ~ 289375 (+)
CI01000020_00126243_00220377 SND1 coding upstream 92811 126243 ~ 221460 (+)
CI01000020_00108833_00112799 NA coding upstream 200844 108833 ~ 113427 (+)
CI01000020_00466505_00489442 NA coding downstream 151757 466276 ~ 489664 (+)
CI01000020_00501322_00502978 LEPB coding downstream 186671 501190 ~ 503119 (+)
CI01000020_00536611_00538626 NA coding downstream 220415 534934 ~ 538982 (+)
CI01000020_00603718_00606833 NA coding downstream 289067 603586 ~ 607523 (+)
CI01000020_00621182_00624570 RAP1B, RAP1A coding downstream 306663 621182 ~ 625201 (+)
G110581 NA non-coding upstream 177219 119161 ~ 137052 (+)
G110552 NA non-coding upstream 213207 98210 ~ 101064 (+)
G110554 NA non-coding upstream 216225 96363 ~ 98046 (+)
G110539 NA non-coding upstream 219013 94749 ~ 95258 (+)
G110538 NA non-coding upstream 220822 57204 ~ 93449 (+)
G110615 NA non-coding downstream 8547 323066 ~ 323265 (+)
G110616 NA non-coding downstream 9945 324464 ~ 324703 (+)
G110617 NA non-coding downstream 10416 324935 ~ 325154 (+)
G110619 NA non-coding downstream 13878 328397 ~ 328731 (+)
G110625 NA non-coding downstream 24085 338604 ~ 338809 (+)
G110589 NA other upstream 87423 180778 ~ 226848 (+)
G110562 NA other upstream 266231 30693 ~ 48040 (+)
CI01000020_00810993_00815495 CDPF1 other downstream 496380 810899 ~ 816510 (+)
CI01000020_01083614_01106789 PLXNC1 other downstream 753537 1083230 ~ 1107257 (+)
CI01000020_01375811_01378288 AVPR2L other downstream 1061850 1373164 ~ 1379068 (+)
CI01000020_02444149_02444833 NA other downstream 2129725 2443278 ~ 2444944 (+)
G111183 NA other downstream 2332992 2647511 ~ 2658913 (+)

Expression


Co-expression Network