G110640


Basic Information

Item Value
gene id G110640
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000020
NCBI id null
chromosome length 7209782
location 351896 ~ 352125 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU125723
GGCTGACAGGTTTTAAAGGATGGAGTTGAGGTCAGACAGGAGACACAATTACTCTGTACACCTGACCTACTGTGATTCTGCTCTTTATTACCTTTTCATTCACATCCCTCATCCACCTTTCGTCTCTCTCCCACTCTCTATCATAGGTTTAGTGTACCACAGAGAGCTGCAGCATCACAAATCTCAGGCTGTTTACTCTGTTGCTATGGAGACGGCTCTCTCACGGTCTG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU125723 True 230 lncRNA 0.47 1 351896 352125

Neighbor

gene id symbol gene type direction distance location
CI01000020_00250359_00289375 SND1 coding upstream 62521 250359 ~ 289375 (+)
CI01000020_00126243_00220377 SND1 coding upstream 130436 126243 ~ 221460 (+)
CI01000020_00108833_00112799 NA coding upstream 238469 108833 ~ 113427 (+)
CI01000020_00466505_00489442 NA coding downstream 114151 466276 ~ 489664 (+)
CI01000020_00501322_00502978 LEPB coding downstream 149065 501190 ~ 503119 (+)
CI01000020_00536611_00538626 NA coding downstream 182809 534934 ~ 538982 (+)
CI01000020_00603718_00606833 NA coding downstream 251461 603586 ~ 607523 (+)
CI01000020_00621182_00624570 RAP1B, RAP1A coding downstream 269057 621182 ~ 625201 (+)
G110634 NA non-coding upstream 5465 346140 ~ 346431 (+)
G110625 NA non-coding upstream 13087 338604 ~ 338809 (+)
G110619 NA non-coding upstream 23165 328397 ~ 328731 (+)
G110617 NA non-coding upstream 26742 324935 ~ 325154 (+)
G110616 NA non-coding upstream 27193 324464 ~ 324703 (+)
G110641 NA non-coding downstream 782 352907 ~ 353517 (+)
G110645 NA non-coding downstream 5500 357625 ~ 357831 (+)
G110663 NA non-coding downstream 35522 387647 ~ 409164 (+)
G110727 NA non-coding downstream 101058 453183 ~ 541078 (+)
G110732 NA non-coding downstream 190475 542600 ~ 543136 (+)
G110589 NA other upstream 125048 180778 ~ 226848 (+)
G110562 NA other upstream 303856 30693 ~ 48040 (+)
CI01000020_00810993_00815495 CDPF1 other downstream 458774 810899 ~ 816510 (+)
CI01000020_01083614_01106789 PLXNC1 other downstream 715931 1083230 ~ 1107257 (+)
CI01000020_01375811_01378288 AVPR2L other downstream 1024244 1373164 ~ 1379068 (+)
CI01000020_02444149_02444833 NA other downstream 2092119 2443278 ~ 2444944 (+)
G111183 NA other downstream 2295386 2647511 ~ 2658913 (+)

Expression


Co-expression Network