G110641


Basic Information

Item Value
gene id G110641
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000020
NCBI id null
chromosome length 7209782
location 352907 ~ 353517 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU125724
TTTTTTAAGTTAAACCAACAATTCTTTTTCAGAGTATCTATTTACACTAAGTGCAAATAGCGTCCTTTGTTGGCAAATGCTATTTACGCTAGCTCCACCCACCGATGTCTGGTTGGGCCACTCAAGTTTTAAAAAAGATGTGGGGTATTCAATGTCTTAAGTGTGGCAGCAGTAGCAAGTAAGGATCGCAAGCCTGGCTTTTAACGTGATTCGACGTGGGGTTTGAATCCGCATTTTGCCAGGCTTGCATTTATTTTCAATAAAAATGAAAATAATGTTCTAAAAGTGAAAATAAACTGCAAACAAGCGTTTAATAATATTAAAAGTGTTTACTGGGTAGGGTTAGGGGAAGATGTAGGGAGGGTTTTTATTCTCCCAATAAGGCAGCATCATTTTAATAATTTTAATAAATATAATCATTTACACTCTATGATATTATTGCATCCTGTTAATGTACAAAAATACTGAGGTGCAAATAGTATCTGCCAATATAAAGTATATAGCATCTAATTACTATTTACTCTTATTGCAAAGAACTGATACTTTTACATGGTGTAAATAGAATCTATCGCTATTTTCACCTAGTGTAAATAGCATATCGCTAAGAAAAT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU125724 True 611 lncRNA 0.34 1 352907 353517

Neighbor

gene id symbol gene type direction distance location
CI01000020_00250359_00289375 SND1 coding upstream 63532 250359 ~ 289375 (+)
CI01000020_00126243_00220377 SND1 coding upstream 131447 126243 ~ 221460 (+)
CI01000020_00108833_00112799 NA coding upstream 239480 108833 ~ 113427 (+)
CI01000020_00466505_00489442 NA coding downstream 112759 466276 ~ 489664 (+)
CI01000020_00501322_00502978 LEPB coding downstream 147673 501190 ~ 503119 (+)
CI01000020_00536611_00538626 NA coding downstream 181417 534934 ~ 538982 (+)
CI01000020_00603718_00606833 NA coding downstream 250069 603586 ~ 607523 (+)
CI01000020_00621182_00624570 RAP1B, RAP1A coding downstream 267665 621182 ~ 625201 (+)
G110640 NA non-coding upstream 782 351896 ~ 352125 (+)
G110634 NA non-coding upstream 6476 346140 ~ 346431 (+)
G110625 NA non-coding upstream 14098 338604 ~ 338809 (+)
G110619 NA non-coding upstream 24176 328397 ~ 328731 (+)
G110617 NA non-coding upstream 27753 324935 ~ 325154 (+)
G110645 NA non-coding downstream 4108 357625 ~ 357831 (+)
G110663 NA non-coding downstream 34130 387647 ~ 409164 (+)
G110727 NA non-coding downstream 99666 453183 ~ 541078 (+)
G110732 NA non-coding downstream 189083 542600 ~ 543136 (+)
G110780 NA non-coding downstream 199672 553189 ~ 553440 (+)
G110589 NA other upstream 126059 180778 ~ 226848 (+)
G110562 NA other upstream 304867 30693 ~ 48040 (+)
CI01000020_00810993_00815495 CDPF1 other downstream 457382 810899 ~ 816510 (+)
CI01000020_01083614_01106789 PLXNC1 other downstream 714539 1083230 ~ 1107257 (+)
CI01000020_01375811_01378288 AVPR2L other downstream 1022852 1373164 ~ 1379068 (+)
CI01000020_02444149_02444833 NA other downstream 2090727 2443278 ~ 2444944 (+)
G111183 NA other downstream 2293994 2647511 ~ 2658913 (+)

Expression


Co-expression Network