G110663


Basic Information

Item Value
gene id G110663
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000020
NCBI id null
chromosome length 7209782
location 387647 ~ 409164 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU125747
TGGGGTGATGAATGTTTGATATGAATATCATATCTTTCATATGAGTATGTGAAATCACATTAGAGGCAAACAGCTGGTGTGTGAAGGGTGCCAGTAGGGCTCTTCAGTAATGACTCCACTCAGGTGGCAAGAAAACATTTCAACTTGTAATGTTTCTCAGTATGCTGCTCCTTTAAGACACCATTAAATTAGCGTATTTCAAAATTAGGCCAGGAAGAAGTAGGCTGTAGATGGATTTTTTTTTTTTTTTTTTTTGCCTGACCAATATGTTCAGTAATTTTTAAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU125747 True 285 lncRNA 0.36 2 387647 409164

Neighbor

gene id symbol gene type direction distance location
CI01000020_00250359_00289375 SND1 coding upstream 98272 250359 ~ 289375 (+)
CI01000020_00126243_00220377 SND1 coding upstream 166187 126243 ~ 221460 (+)
CI01000020_00108833_00112799 NA coding upstream 274220 108833 ~ 113427 (+)
CI01000020_00466505_00489442 NA coding downstream 57112 466276 ~ 489664 (+)
CI01000020_00501322_00502978 LEPB coding downstream 92026 501190 ~ 503119 (+)
CI01000020_00536611_00538626 NA coding downstream 125770 534934 ~ 538982 (+)
CI01000020_00603718_00606833 NA coding downstream 194422 603586 ~ 607523 (+)
CI01000020_00621182_00624570 RAP1B, RAP1A coding downstream 212018 621182 ~ 625201 (+)
G110645 NA non-coding upstream 29816 357625 ~ 357831 (+)
G110641 NA non-coding upstream 34130 352907 ~ 353517 (+)
G110640 NA non-coding upstream 35522 351896 ~ 352125 (+)
G110634 NA non-coding upstream 41216 346140 ~ 346431 (+)
G110625 NA non-coding upstream 48838 338604 ~ 338809 (+)
G110727 NA non-coding downstream 44019 453183 ~ 541078 (+)
G110732 NA non-coding downstream 133436 542600 ~ 543136 (+)
G110780 NA non-coding downstream 144025 553189 ~ 553440 (+)
G110783 NA non-coding downstream 146875 556039 ~ 556269 (+)
G110714 NA non-coding downstream 149757 558921 ~ 560207 (+)
G110589 NA other upstream 160799 180778 ~ 226848 (+)
G110562 NA other upstream 339607 30693 ~ 48040 (+)
CI01000020_00810993_00815495 CDPF1 other downstream 401735 810899 ~ 816510 (+)
CI01000020_01083614_01106789 PLXNC1 other downstream 658892 1083230 ~ 1107257 (+)
CI01000020_01375811_01378288 AVPR2L other downstream 967205 1373164 ~ 1379068 (+)
CI01000020_02444149_02444833 NA other downstream 2035080 2443278 ~ 2444944 (+)
G111183 NA other downstream 2238347 2647511 ~ 2658913 (+)

Expression


Co-expression Network