G111625


Basic Information

Item Value
gene id G111625
gene name NA
gene type misc
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000020
NCBI id null
chromosome length 7209782
location 584212 ~ 587067 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU126821
AAAAAAAAGTCACAGCATTCACACAAAGCACAGACAAACAAGCTAATGATCCCTACTGCAAAAATCCCATTCTTGAGAAAAGTAAGAGCTCTTTACAACCGTGTAGACTGACAGACTGACAAGACACAGTCCAGATTCAGCTGATTATAGTCACTCTCTAATCCAGTGCAACGCGAGCACTTCCTGCTGCAGAGTTAAATCAAAGCAGGCCAGGAGGCAGGGCGGAACAATGCCTGAGAAGCTGCAGTTCTCTCTCTTCTCCATTGCATGTGGAATGTGGTTGTTTACATAGGCCGTTCGGCCGACCCGCTATCTTGTATCAAATGGTCCCTGCGCCCGAAAAGGAAGACCAGAGGGAATGGAATTGTGCTCTGTGTAATTCCACATCGGAATGTAGAGCAGGGACGCATCTCTTTTGTCCTGGGCTGGAACTCCGTGAGCAGTGATTCAGAGAGAGGCGCAGAGAGACCCCCGGGGGGATCCCCCCCAAACCTTGGGCGTTGCCAGTTCTGGCCTGAGGAAGCACTGAAATGCTTGAGAATGTTCTGGCTGTTTTTCCGTCACACCAGAAATAACATCAATACAAATACAGAGCGTTTGAACTGGAAAGAGCTGAACAGTGAAGCATTTCTATAGCCTATCTAAAGTGTCTAAAAATACATGTTCGAGTAAGTAAAAAAGCGAGAGAAAGAGATAAAAGAATACCAATGTAGCATAAAGCAATTCAATTTAGCATTATGAGGTGAGAGGTCATGATTCTAAGTAGTGTTGTCAAAAGTAATCCTTCACTAAATTAAATCCAGAATTCATTCAGAAATGAACTCCAGAAACATGCTGTAACTGTTGGAATTGTTTTAATGTACTAAATCGTACACATTATATGCCACTTTATGATAGAACACTTTTCAACAATAATGGATATAATAGAAGTAATAGACACAATAGAAGTAAATTTTATAACTAAAGAACTGTGATGAGTCTTTAAAAGTGCCACTTAACCTGCAGAAACTTCAGCAATAGTTAAAGTCAGCAGGGAATGGAAATTTCCCATATATTTTTTAATGTATCTCATTAAACTTATTGTGAATGATTCATCCAGGCATACGTATTATTTTTTTGATTTTTCATGTTTAGCTCTTTTTTTTTTTTTAATCAAAATGTCTTAAAGCAACATAATTTACTCACCCGCATGTCATTCCAAACTCATAAGACTTTGGTTAATCTTCGAAAATCAAATTAAGAGGTTTATGAAAAATATTTTAATTTGTATTTTGAAGATTAGCCAGTCTTATGGGTTTGGAATGACATGAGGTTGAGTAAATGACAGAATTAAAATTTTTGAGTGAAGAACTATCCCTTTAACTCGATGTTCCAAAACAGACTTCTCCAATCATTTTGCCTGCTTAAACCCGCCCCTTTCTTCCAATCGACTGCAACCTTGTATTCAGATCTGCCTCCAGCCAAATCAACAACCAATGGATAGAACCTACAGATGAAAAGATCTGTTGCTACTTCTGTTACATCACAACTTTAAAATGCAGAAAAATGCAAACACTCTTCATGTTACTGATTCCACTTCCATTACTAATTTAACTTTCAGAACAATAAGGTAATGATCAAGAACTGAAAAGGCTCCAATTTACATTTAGGCCTAATAAAAATCACACCATCCAACAATTTACAAAAGTATAAGCATATTTATTGACCTCCACTTCCATGCCCCTGTCACATTTTTTCAGATTTTATAGCTCTATATAACACATCATAAGTAGCAGAATATCTGAACCTTGCCATGCACTTTGGGGATGTTCATGTCTCTACACGATCTCTAAAGGGAAAATGTCTTCGTTCAGATGTTTTACACTCATCCTAGATAGAGAGCCTGAAGATGTGCTGCCACAGCTGACTTGCATGCAGTCATCAGCAAGTCAATGCTCACGACTAACAAGTCTGGGCATCAACAGTACAGCAGAGTACCTATTAAAGAACACTGGAACAGCCCTACAATAAGGCTGTGGTGTTCGCTGCATTCTTAAGAAGATGAATACAATCATTAGTGATTGTTTCATAAATTATTCAAAAACAAAAAAGGGACATAAAGATGTATTATCTGTTTTAGAATGTCATGTGCACTAATTAGGCTATCAATCGATTAAAATAATTCATTTATTTTATGGTTAACGTGTTAAAGAATGCACAAAATAAAAT
>TU126822
ATTTACAACATGTTTTTGAAGCGTTTATCATTGTAGCCAATCACAGACATATCTGTTGAGCGCGTGAACACAATAGACAATCAGAGGTGTTTACAGATCCGCTTAACGCGTCATATTTTTAAAATTTGGTATCAAAGTCGGTACTTTTGACAACACTAATTTTAAGGGTGGATGAACTTTGTGCCTGTCAATATAGTCATCCTTCACTAAATTAAATCCAGAATTCATTCAGAAATGAACTCCAGAAACATGCTGTAACTGTTGGAATTGTTTTAATGTACTAAATCGTACACATTATATGCCACTTTATGATAGAACACTTTTCAACAATAATGGATATAATAGAAGTAATAGACACAATAGAAGTAAATTTTATAACTAAAGAACTGTGATGAGTCTTTAAAAGTGCCACTTAACCTGCAGAAACTTCAGCAATAGTTAAAGTCAGCAGGGAATGGAAATTTCCCATATATTTTTTAATGTATCTCATTAAACTTATTGTGAATGATTCATCCAGGCATACGTATTATTTTTTTGATTTTTCATGTTTAGCTCTTTTTTTTTTTTTAATCAAAATGTCTTAAAGCAACATAATTTACTCACCCGCATGTCATTCCAAACTCATAAGACTTTGGTTAATCTTCGAAAATCAAATTAAGAGGTTTATGAAAAATATTTTAATTTGTATTTTGAAGATTAGCCAGTCTTATGGGTTTGGAATGACATGAGGTTGAGTAAATGACAGAATTAAAATTTTTGAGTGAAGAACTATCCCTTTAACTCGATGTTCCAAAACAGACTTCTCCAATCATTTTGCCTGCTTAAACCCGCCCCTTTCTTCCAATCGACTGCAACCTTGTATTCAGATCTGCCTCCAGCCAAATCAACAACCAATGGATAGAACCTACAGATGAAAAGATCTGTTGCTACTTCTGTTACATCACAACTTTAAAATGCAGAAAAATGCAAACACTCTTCATGTTACTGATTCCACTTCCATTACTAATTTAACTTTCAGAACAATAAGGTAATGATCAAGAACTGAAAAGGCTCCAATTTACATTTAGGCCTAATAAAAATCACACCATCCAACAATTTACAAAAGTATAAGCATATTTATTGACCTCCACTTCCATGCCCCTGTCACATTTTTTCAGATTTTATAGCTCTATATAACACATCATAAGTAGCAGAATATCTGAACCTTGCCATGCACTTTGGGGATGTTCATGTCTCTACACGATCTCTAAAGGGAAAATGTCTTCGTTCAGATGTTTTACACTCATCCTAGATAGAGAGCCTGAAGATGTGCTGCCACAGCTGACTTGCATGCAGTCATCAGCAAGTCAATGCTCACGACTAACAAGTCTGGGCATCAACAGTACAGCAGAGTACCTATTAAAGAACACTGGAACAGCCCTACAATAAGGCTGTGGTGTTCGCTGCATTCTTAAGAAGATGAATACAATCATTAGTGATTGTTTCATAAATTATTCAAAAACAAAAAAGGGACATAAAGATGTATTATCTGTTTTAGAATGTCATGTGCACTAATTAGGCTATCAATCGATTAAAATAATTCATTTATTTTATGGTTAACGTGTTAAAGAATGCACAAAATAAAAT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU126821 False 2208 TUCP 0.38 3 584212 587067
TU126822 True 1626 lncRNA 0.34 2 584212 586053

Neighbor

gene id symbol gene type direction distance location
CI01000020_00559356_00581137 NA coding downstream 2952 559194 ~ 581260 (-)
CI01000020_00540382_00550204 IMDH1, IMPDH1B, IMPDH1, IMPDH1A coding downstream 33291 540264 ~ 550921 (-)
CI01000020_00222688_00225252 LRRC4.1 coding downstream 358679 222499 ~ 225533 (-)
CI01000020_00117520_00120781 PAX4 coding downstream 463431 117507 ~ 120781 (-)
CI01000020_00106309_00106981 ARAP1 coding downstream 477231 106309 ~ 106984 (-)
CI01000020_00589640_00593467 NA coding upstream 3438 589491 ~ 594310 (-)
CI01000020_00635947_00637797 NA coding upstream 49584 635637 ~ 638306 (-)
CI01000020_00648652_00656756 SLC26A3.1 coding upstream 62206 648259 ~ 657256 (-)
CI01000020_00668211_00680679 SLC26A3.2 coding upstream 81816 667869 ~ 680760 (-)
CI01000020_00686072_00697099 SLC26A4 coding upstream 99783 685836 ~ 697489 (-)
G111618 NA non-coding downstream 22880 561085 ~ 561332 (-)
G111602 NA non-coding downstream 26817 557162 ~ 557395 (-)
G111379 NA non-coding downstream 82820 467312 ~ 501392 (-)
G111500 NA non-coding downstream 231565 352409 ~ 352647 (-)
G111496 NA non-coding downstream 236535 347430 ~ 347677 (-)
G111639 NA non-coding upstream 63595 649648 ~ 650079 (-)
G111641 NA non-coding upstream 71758 657811 ~ 658038 (-)
G111643 NA non-coding upstream 74146 660199 ~ 660423 (-)
G111645 NA non-coding upstream 74929 660982 ~ 661226 (-)
G111657 NA non-coding upstream 143094 729147 ~ 729982 (-)
G111351 NA other downstream 477228 97024 ~ 102468 (-)
G111638 NA other upstream 59936 645989 ~ 647529 (-)
G111674 NA other upstream 229327 814110 ~ 887919 (-)
G111774 NA other upstream 387555 973608 ~ 974641 (-)
CI01000020_01463785_01480876 GNPTAB other upstream 894091 1463771 ~ 1481058 (-)

Expression


Co-expression Network