G111699


Basic Information

Item Value
gene id G111699
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000020
NCBI id null
chromosome length 7209782
location 756298 ~ 757721 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU126924
GCCCCTGACCTCAGCTGACACTACAGGCCACTCAAATCATCTCAGAGAGCCGCACAAAAGCGAGGATTGATTGTGTGAATGCGCCAGGTTAGCTGAGGCGCCTACTCTCTCTGTGGTGATTGCATTTTAAATTTCAAATGATGTATGCGTTTTTCATGGGGTTAGCCGAGGTGAACCGGCTTGGATGCGGGCCAGCGAGGAGACAGATGAATTTATGACTTTGCTGGCGCAAAGGCGCGTAGGATTGTTCCCCTCTTTGTAATCTCGAAGGGCTCGGTTGGCTTTCCTCAATTATCTTTCGATTTTCAAAGTGTTTTAGCAAAAGATGCCGGTAACGAGCCATCGGCGTCATTATCAAATCGTTTCGAAAGGCCAAGCGTAATGCTTAGATTACGGTACCGCGTCCAGGTCATGTTGACACATTACATGCTTGGCCTTCGGTCTCTGCTGAAATGCAGCAAGGGAAAAAGGGGAGAGAGCGCAGAAAAACTTGAGGCCGAGCACAAAAGCAGAGGAGGGATGAAGAAAAAGTCTGAGAGAAAAAGAATATGACAATAACATATGCCAAATTTCTGTCATCTGTTGCAGAGAGTTTGGGGAGACATTCCTGTGGGATTGACAGTTTGGCGTGGCTGTAGCACCAGGGGCCAGTCATGGAAAGACACTTACAGCATGCACACACACTTTACCAAGTCAGCCAGACCTACTGAATGCGATCTGGCCTCGGTCGTGTGCTCTCAGCATCAGCCTGGCCCGATCCTTCCCGCCTCGGGTTACGAAGCTCTGTGTTCAGCGGTGGTTTGGTTATTTCCCCGACAGGAGATGTAAATGAAAAGATATTTTTGGCAAGATAAATCGAGTGCTGAGTGACAACATTAAGACAAGTGGAAACAGATTGCACAAATGACTGATGACCTTTTTCTGTTTTTTTTCCAGTTGTTTTGAAGTGCTGACATCATCAGCATTCTGAATGTCTCCTCTGTCAGAAGGTATAGAAAGGACTAGAAAAATGATTGTGGAAAAATGAAAAATACAAAGGCCCTTCGAAATAACGCATGGCATTGTTTACAGTGAGTGTTGGATCACATTAAGAGGCAAACATATGTAAAACATCTGACTAAGGGTTCATGTAAAACCTCAAAAGATACCTAAGCAATGATAAGGACAACTAAAGCTACACATGTGAATTTCTCTAATGCAAAATTAACTCCAAACAGACTGACAACGAATTCAAAACACACATTTTACAAATAACCATGGAGAAATAAATCTGGCGGTGATAAAATTGTGCTTCCAAAATATGTTTAAATTTATGTTCCTTTTGAGTAAAAGTATAGGAAAG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU126924 True 1342 lncRNA 0.43 2 756298 757721

Neighbor

gene id symbol gene type direction distance location
CI01000020_00734012_00742045 WNT7BA, WNT7BB, WNT7B coding downstream 14253 733617 ~ 742045 (-)
CI01000020_00686072_00697099 SLC26A4 coding downstream 58809 685836 ~ 697489 (-)
CI01000020_00668211_00680679 SLC26A3.2 coding downstream 75538 667869 ~ 680760 (-)
CI01000020_00648652_00656756 SLC26A3.1 coding downstream 99531 648259 ~ 657256 (-)
CI01000020_00635947_00637797 NA coding downstream 117992 635637 ~ 638306 (-)
CI01000020_00771062_00774260 NA coding upstream 13238 770959 ~ 774524 (-)
CI01000020_00901339_00902642 NA coding upstream 143506 901227 ~ 902642 (-)
CI01000020_00903124_00916916 NA coding upstream 145385 903106 ~ 916916 (-)
CI01000020_00919569_00931298 CFAP54 coding upstream 161848 919569 ~ 931298 (-)
CI01000020_00936240_00942015 NCAPH2 coding upstream 178089 935810 ~ 942015 (-)
G111657 NA non-coding downstream 26316 729147 ~ 729982 (-)
G111645 NA non-coding downstream 95072 660982 ~ 661226 (-)
G111643 NA non-coding downstream 95875 660199 ~ 660423 (-)
G111641 NA non-coding downstream 98260 657811 ~ 658038 (-)
G111639 NA non-coding downstream 106219 649648 ~ 650079 (-)
G111720 NA non-coding upstream 31218 788939 ~ 789461 (-)
G111674 NA non-coding upstream 56389 814110 ~ 887919 (-)
G111762 NA non-coding upstream 130407 888128 ~ 888422 (-)
G111694 NA non-coding upstream 131271 888992 ~ 892782 (-)
G111670 NA non-coding upstream 140484 898205 ~ 900349 (-)
G111638 NA other downstream 108769 645989 ~ 647529 (-)
G111625 NA other downstream 169231 584212 ~ 587067 (-)
G111351 NA other downstream 649314 97024 ~ 102468 (-)
G111774 NA other upstream 215887 973608 ~ 974641 (-)
CI01000020_01463785_01480876 GNPTAB other upstream 722423 1463771 ~ 1481058 (-)
G112136 NA other upstream 1360642 2040034 ~ 2121232 (-)
CI01000020_02121873_02122329 KISS2 other upstream 1364027 2121714 ~ 2122619 (-)

Expression


Co-expression Network