G110741


Basic Information

Item Value
gene id G110741
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000020
NCBI id null
chromosome length 7209782
location 888128 ~ 888384 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU125827
GAAGCGACGAGAATACTTTTTGTGCACAAAAACAAAACAAAAATAACGACTTTATTCAACAATTTCTCCTACGCAGTTTACGTTGAAGACACATTGCAGAGCTTCCGTGTTCTACGTCAGAACACCAACTCTGCTCATGTGTGTTCGGACGTAAACACAAAAATGCTGCATCAACAGTGTAGGAGACTGACAGGGTAGAGAAGAAATTGTTGAATAAAGTAGTTATTTTTGTTTTGTTTTTGTGCACAAAAAATATT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU125827 True 257 lncRNA 0.37 1 888128 888384

Neighbor

gene id symbol gene type direction distance location
CI01000020_00819154_00820506 NA coding upstream 66855 818849 ~ 821273 (+)
CI01000020_00810993_00815495 CDPF1 coding upstream 72420 810899 ~ 816510 (+)
CI01000020_00798124_00809552 PPARAA coding upstream 78071 797612 ~ 810057 (+)
CI01000020_00752731_00769950 NA coding upstream 118101 752694 ~ 770027 (+)
CI01000020_00715984_00729331 ATXN10 coding upstream 158167 715984 ~ 729961 (+)
CI01000020_00892454_00900973 RINT1 coding downstream 4070 892454 ~ 901051 (+)
CI01000020_00934438_00935330 NA coding downstream 46054 934438 ~ 935356 (+)
CI01000020_00949140_00951237 SOCS2 coding downstream 60372 948756 ~ 952785 (+)
CI01000020_00959078_00971223 CRADD coding downstream 70694 959078 ~ 971999 (+)
CI01000020_01083614_01106789 PLXNC1 coding downstream 194846 1083230 ~ 1107257 (+)
G110714 NA non-coding upstream 327921 558921 ~ 560207 (+)
G110783 NA non-coding upstream 331859 556039 ~ 556269 (+)
G110780 NA non-coding upstream 334688 553189 ~ 553440 (+)
G110732 NA non-coding upstream 344992 542600 ~ 543136 (+)
G110808 NA non-coding downstream 4558 892942 ~ 893173 (+)
G110822 NA non-coding downstream 81009 969393 ~ 970349 (+)
G110742 NA non-coding downstream 86487 974871 ~ 975583 (+)
G110738 NA non-coding downstream 87285 975669 ~ 976633 (+)
G110836 NA non-coding downstream 139060 1027444 ~ 1066165 (+)
G110589 NA other upstream 661280 180778 ~ 226848 (+)
G110562 NA other upstream 840088 30693 ~ 48040 (+)
CI01000020_01375811_01378288 AVPR2L other downstream 487985 1373164 ~ 1379068 (+)
CI01000020_02444149_02444833 NA other downstream 1555860 2443278 ~ 2444944 (+)
G111183 NA other downstream 1759127 2647511 ~ 2658913 (+)
G112679 NA other downstream 2412787 3301171 ~ 3303730 (+)

Expression


Co-expression Network