G110808


Basic Information

Item Value
gene id G110808
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000020
NCBI id null
chromosome length 7209782
location 892942 ~ 893173 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU125900
AGTACACTTGACTTGACTAATTTTTCATTTCCTTCTGACCTTTTGAAAATGCAGATATGTTACAAATGCCTTTAAGTTATTTAGGTGATTCGATTGGTCATCATGAACTAGCAAGAAAAAAACAAAACATGAGTATTTAAAAAAAAAAAATACGCACACACTTATGAATATACTGTATATATAAAGCATATTTTTCTTCTAAAAATGTAAAATTAACATTTTAAAAATAAAC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU125900 True 232 lncRNA 0.25 1 892942 893173

Neighbor

gene id symbol gene type direction distance location
CI01000020_00819154_00820506 NA coding upstream 71669 818849 ~ 821273 (+)
CI01000020_00810993_00815495 CDPF1 coding upstream 77234 810899 ~ 816510 (+)
CI01000020_00798124_00809552 PPARAA coding upstream 82885 797612 ~ 810057 (+)
CI01000020_00752731_00769950 NA coding upstream 122915 752694 ~ 770027 (+)
CI01000020_00715984_00729331 ATXN10 coding upstream 162981 715984 ~ 729961 (+)
CI01000020_00934438_00935330 NA coding downstream 41265 934438 ~ 935356 (+)
CI01000020_00949140_00951237 SOCS2 coding downstream 55583 948756 ~ 952785 (+)
CI01000020_00959078_00971223 CRADD coding downstream 65905 959078 ~ 971999 (+)
CI01000020_01083614_01106789 PLXNC1 coding downstream 190057 1083230 ~ 1107257 (+)
CI01000020_01120223_01142481 UHRF1BP1L coding downstream 227050 1120223 ~ 1142573 (+)
G110741 NA non-coding upstream 4558 888128 ~ 888384 (+)
G110714 NA non-coding upstream 332735 558921 ~ 560207 (+)
G110783 NA non-coding upstream 336673 556039 ~ 556269 (+)
G110780 NA non-coding upstream 339502 553189 ~ 553440 (+)
G110822 NA non-coding downstream 76220 969393 ~ 970349 (+)
G110742 NA non-coding downstream 81698 974871 ~ 975583 (+)
G110738 NA non-coding downstream 82496 975669 ~ 976633 (+)
G110836 NA non-coding downstream 134271 1027444 ~ 1066165 (+)
G110743 NA non-coding downstream 164268 1057441 ~ 1068884 (+)
G110589 NA other upstream 666094 180778 ~ 226848 (+)
G110562 NA other upstream 844902 30693 ~ 48040 (+)
CI01000020_01375811_01378288 AVPR2L other downstream 483196 1373164 ~ 1379068 (+)
CI01000020_02444149_02444833 NA other downstream 1551071 2443278 ~ 2444944 (+)
G111183 NA other downstream 1754338 2647511 ~ 2658913 (+)
G112679 NA other downstream 2407998 3301171 ~ 3303730 (+)

Expression


Co-expression Network