G111773


Basic Information

Item Value
gene id G111773
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000020
NCBI id null
chromosome length 7209782
location 975052 ~ 975584 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU126999
CGTGAATTATCCCGCTTATAGGGTTATTTGCCAGCACTGACAACTTAAAGCTGCTTATTGATGTTTGCAGCGCAATATTAGACCGGAAACGGTAAAAATGACGGATATTTTCGTCAGTTATGGCTTGTTAGGTCTAGCATTCTACCTGCTTTGAATCAGACAGAGATGAAGTTGTGCGTAAGGTTACTTTTACTTGAATGAATTATAGCATTTATTTGAATTCATTATAGGTCAAGAGAGAGAGAGAGTTGTGTGAATTAGTTAACGTTACCTTTGTCTGTTCAGTGTCTCTCTATTAACAACGAAGCTCTGAGTTTAGTTACTTCAAAACCAGCGATGTTATCCCCTCGTTGCTGAGAAATATAATGTAGCGATTCAGTAGCTATTTTATTAAAAGTCGCGGGGCAGTTGATAAGTTTCTGTGGTCCAGAATGTTTGGTGTGCGATCTCCGATGCGAGTACAGCGCGAGTAACGTATATGTGTGTGCTTCAAAAGCAGCGCATTAAAGGGATAGTTCACCCCAAAATGAAAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU126999 True 533 lncRNA 0.40 1 975052 975584

Neighbor

gene id symbol gene type direction distance location
CI01000020_00936240_00942015 NCAPH2 coding downstream 33037 935810 ~ 942015 (-)
CI01000020_00919569_00931298 CFAP54 coding downstream 43754 919569 ~ 931298 (-)
CI01000020_00903124_00916916 NA coding downstream 58136 903106 ~ 916916 (-)
CI01000020_00901339_00902642 NA coding downstream 72410 901227 ~ 902642 (-)
CI01000020_00771062_00774260 NA coding downstream 200528 770959 ~ 774524 (-)
CI01000020_00996310_01006955 PLXNC1 coding upstream 20726 996310 ~ 1006955 (-)
CI01000020_01011931_01030587 NA coding upstream 36347 1011931 ~ 1031474 (-)
CI01000020_01033833_01045061 NA coding upstream 58249 1033833 ~ 1045734 (-)
CI01000020_01048657_01058122 NA coding upstream 73073 1048657 ~ 1058122 (-)
CI01000020_01060900_01081919 NA coding upstream 85316 1060850 ~ 1081919 (-)
G111769 NA non-coding downstream 18319 956419 ~ 956733 (-)
G111670 NA non-coding downstream 74703 898205 ~ 900349 (-)
G111694 NA non-coding downstream 82270 888992 ~ 892782 (-)
G111762 NA non-coding downstream 86630 888128 ~ 888422 (-)
G111674 NA non-coding downstream 87133 814110 ~ 887919 (-)
G111775 NA non-coding upstream 145 975729 ~ 976452 (-)
G111781 NA non-coding upstream 7734 983318 ~ 983567 (-)
G111782 NA non-coding upstream 9953 985537 ~ 985870 (-)
G111784 NA non-coding upstream 12687 988271 ~ 988496 (-)
G111786 NA non-coding upstream 22529 998113 ~ 998477 (-)
G111774 NA other downstream 411 973608 ~ 974641 (-)
CI01000020_00648652_00656756 SLC26A3.1 other downstream 317796 648259 ~ 657256 (-)
G111638 NA other downstream 327523 645989 ~ 647529 (-)
G111625 NA other downstream 387985 584212 ~ 587067 (-)
CI01000020_01463785_01480876 GNPTAB other upstream 504560 1463771 ~ 1481058 (-)
G112136 NA other upstream 1142779 2040034 ~ 2121232 (-)
CI01000020_02121873_02122329 KISS2 other upstream 1146164 2121714 ~ 2122619 (-)
CI01000020_02828968_02849511 NA other upstream 1868716 2828763 ~ 2849518 (-)
CI01000020_03304491_03309596 UBE2H other upstream 2329316 3300912 ~ 3310248 (-)

Expression


Co-expression Network