G110738


Basic Information

Item Value
gene id G110738
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000020
NCBI id null
chromosome length 7209782
location 975669 ~ 976633 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU125824
AATCGTTTAATGCACAGCTAGCCGTGGATTATCCCTTACTTAGGCTAATGCACAGCTAGCCGTTGATGATTATCCATTAGCCTACATATCATAACGTTACTTATTACCTTTTCTTTTTCATATTTTTAAAACACATTTTTATTCAGTTCCACATATATTTTCGTAGTGTGACAAATTAATTTCCAAAACTACTAAATCATGTAGTCAGGTAACAAGAGCCCATAAAAACTGCATGCCTAATAATTAGGCCATGGGCCTAGACAAGAATTGGACATATTGTAGTTTAAAAACATTTTAGATAAAATATAGCATTTGATGTTATAATGTTTGAAATGCTGTTTCCAACAATCTAAGGCTACAACATCTGGTCTGCTCTATTGTTTTTCTTTCCATCTGTCACTCTTGCTGTTTTTATTCAAGTGCTGTTTACTCAAAGTGTAATCAATATTTACAGAGTAGGTGTCTGTAATATGACATAGGTCATTTCCTAATCTCTCACTTATTAATCAGAAAGTGTTTGTGTGTGTGTGTGTGCCATTATTCGTAAACATTTGCGCGCGTCAGTTTCTCTGCTGTGTTTACGCGCTCATCCGCTCCCTCTCAGGTTTGTTTTCTGCTTTGTCTCCCAGGTGTTACTGCCGTGTTATGAGACTTTGAATGCTTTCCTAGAATCTGAGCGTGAAAGTTTACATTGATGTATTATTGACTTACCTGGTTAAATATAAATGGCCATCAACAGCCCCATTGTCCCTGAGGTGATCCAATAATGTCATGTTTATGAAATCACAGAAGACCTTTTTGTGCTATTACATTGATAACTGATCGTTTATGATGAATGTTCATCGTTTTCCAATGAGGAACATTAATAAACATCCACTACAACCCCATGTTGTGTTTTCTGAATAATTGACCGTTATTTTCACTAAACATGCACAAACACAACTATCTGACGCGCGCGGGCCCTC

Function

NR:

description
PREDICTED: protein Dr1 isoform X2

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU125824 True 965 lncRNA 0.36 1 975669 976633

Neighbor

gene id symbol gene type direction distance location
CI01000020_00959078_00971223 CRADD coding upstream 3670 959078 ~ 971999 (+)
CI01000020_00949140_00951237 SOCS2 coding upstream 22884 948756 ~ 952785 (+)
CI01000020_00934438_00935330 NA coding upstream 40313 934438 ~ 935356 (+)
CI01000020_00892454_00900973 RINT1 coding upstream 74618 892454 ~ 901051 (+)
CI01000020_00819154_00820506 NA coding upstream 154396 818849 ~ 821273 (+)
CI01000020_01083614_01106789 PLXNC1 coding downstream 106597 1083230 ~ 1107257 (+)
CI01000020_01120223_01142481 UHRF1BP1L coding downstream 143590 1120223 ~ 1142573 (+)
CI01000020_01147997_01150696 NA coding downstream 170912 1147545 ~ 1150963 (+)
CI01000020_01187688_01253805 NA coding downstream 210946 1187579 ~ 1254010 (+)
CI01000020_01275836_01316392 ANKS1B coding downstream 299203 1275836 ~ 1316392 (+)
G110742 NA non-coding upstream 86 974871 ~ 975583 (+)
G110822 NA non-coding upstream 5320 969393 ~ 970349 (+)
G110808 NA non-coding upstream 82496 892942 ~ 893173 (+)
G110741 NA non-coding upstream 87285 888128 ~ 888384 (+)
CI01000020_00752731_00769950 NA non-coding upstream 187043 752694 ~ 770027 (+)
G110836 NA non-coding downstream 50811 1027444 ~ 1066165 (+)
G110743 NA non-coding downstream 80808 1057441 ~ 1068884 (+)
CI01000020_01375811_01378288 AVPR2L non-coding downstream 397824 1373164 ~ 1379068 (+)
G110891 NA non-coding downstream 403045 1379678 ~ 1379912 (+)
G110892 NA non-coding downstream 403579 1380212 ~ 1380452 (+)
CI01000020_00810993_00815495 CDPF1 other upstream 159159 810899 ~ 816510 (+)
G110589 NA other upstream 748821 180778 ~ 226848 (+)
G110562 NA other upstream 927629 30693 ~ 48040 (+)
CI01000020_02444149_02444833 NA other downstream 1467611 2443278 ~ 2444944 (+)
G111183 NA other downstream 1670878 2647511 ~ 2658913 (+)
G112679 NA other downstream 2324538 3301171 ~ 3303730 (+)

Expression


Co-expression Network