G110743


Basic Information

Item Value
gene id G110743
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000020
NCBI id null
chromosome length 7209782
location 1057441 ~ 1068884 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU125829
AATCCAGGATCCATTTCTAACTGCTGCCACTGATGACATTGAGCTGTACTTGAACACCACAGAGAGCGGCTGAAGTGCACTACCACTCTACAACACAAACAACAAATGAAACTTTATGACTTTAATAGTAAAATTACATTTTATCATGCAACATTCAATTAAAAAAGTTATCCTTAATTCTATCAGAATAAAAATACTCTTTTTAAAAAAAGATGTGTAGGCCTATATATTGAATGCATTTTCCAACCTCAGAACCACATATCTTGTCACCAGTAAAGCAGAAACTCTTCACTCGGCCTTTAACTGTACTGATGTCGTACAGAGCCAGCGCGGTGTTCTCCGGATCCTGCTGATTCTGCGCACTGAACACACCTGCCCAAATAACGCCGTTCACTGAGGGAATAACGGTGGAGGCGACGAGCACTGGACGAGCTTTATCATTGCAGCACTGTATCGTTGCAGCCTGTAGGGATCTGAAGATGTCTGTCTTTTTATCTTTAGAGCTGTCCATCCACAGGACGTGCACTTTACTCTCTGAGTCAGTCTTTGCGTTGAGAAACAAGTACGACTCTGAGGGCGAAACTCTCTGGAATCCGTCAACAAACTCCACATCGCCCGCGGTGCTCTGAATGGAGGGGAGTGTTCCTTCTTCTATGTTGATGAAAATTCCATGAAACTGAGACTGTAAAGTGTTCCACAAGGTAACAACAGGATACGGAGGTTTTCCATCATCGTCCTTTTTACCAACCAAAAGGTACCTGCCGGTACTCGTACCTGCTATGAACGCAACAGATTTCTCATTCTGTCTCGGTCCTACCGATATACCACTTTCATAGTAAATGCTCTTTGTAATGTCACTGAGGTCAAGAACTTCACAATATCCATTTGTAAAGGTCCCACAGGTTATCAGGGTGTCGTTGTCGTCAAAAGGCACCAGAATGTTGACTCTATTTTGATCAGTGTTAGTGATGTCCTTCCTCTTCTCCACAGAAAGATCGAGTCTCATCTGATGTAGTCGATGGTCAGTAAGAACGAACAACTTACTTTTACCAACTACAAAGTCCTTGATGTCTCCATCAAAGTTCACCACATCAC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU125829 True 1095 lncRNA 0.43 2 1057441 1068884

Neighbor

gene id symbol gene type direction distance location
CI01000020_00959078_00971223 CRADD coding upstream 85442 959078 ~ 971999 (+)
CI01000020_00949140_00951237 SOCS2 coding upstream 104656 948756 ~ 952785 (+)
CI01000020_00934438_00935330 NA coding upstream 122085 934438 ~ 935356 (+)
CI01000020_00892454_00900973 RINT1 coding upstream 156390 892454 ~ 901051 (+)
CI01000020_00819154_00820506 NA coding upstream 236168 818849 ~ 821273 (+)
CI01000020_01083614_01106789 PLXNC1 coding downstream 14346 1083230 ~ 1107257 (+)
CI01000020_01120223_01142481 UHRF1BP1L coding downstream 51339 1120223 ~ 1142573 (+)
CI01000020_01147997_01150696 NA coding downstream 78661 1147545 ~ 1150963 (+)
CI01000020_01187688_01253805 NA coding downstream 118695 1187579 ~ 1254010 (+)
CI01000020_01275836_01316392 ANKS1B coding downstream 206952 1275836 ~ 1316392 (+)
G110738 NA non-coding upstream 80808 975669 ~ 976633 (+)
G110742 NA non-coding upstream 81858 974871 ~ 975583 (+)
G110822 NA non-coding upstream 87092 969393 ~ 970349 (+)
G110808 NA non-coding upstream 164268 892942 ~ 893173 (+)
G110741 NA non-coding upstream 169057 888128 ~ 888384 (+)
CI01000020_01375811_01378288 AVPR2L non-coding downstream 305573 1373164 ~ 1379068 (+)
G110891 NA non-coding downstream 310794 1379678 ~ 1379912 (+)
G110892 NA non-coding downstream 311328 1380212 ~ 1380452 (+)
G110908 NA non-coding downstream 318454 1387338 ~ 1387541 (+)
G110909 NA non-coding downstream 318725 1387609 ~ 1387903 (+)
CI01000020_00810993_00815495 CDPF1 other upstream 240931 810899 ~ 816510 (+)
G110589 NA other upstream 830593 180778 ~ 226848 (+)
G110562 NA other upstream 1009401 30693 ~ 48040 (+)
CI01000020_02444149_02444833 NA other downstream 1375360 2443278 ~ 2444944 (+)
G111183 NA other downstream 1578627 2647511 ~ 2658913 (+)
G112679 NA other downstream 2232287 3301171 ~ 3303730 (+)
G112753 NA other downstream 2645497 3714381 ~ 3733586 (+)

Expression


Co-expression Network