G110892


Basic Information

Item Value
gene id G110892
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000020
NCBI id null
chromosome length 7209782
location 1380212 ~ 1380452 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU126007
AAAAGGGTTAGTTCACCCAAAAATGAAATTTCTGTCATTAAGTACCAGTCAGGGTTGCCAGGTTTTCACAACAAAACCCGCCCAATTGCTACTCAATACTAGCCCAATCGCGTCCCCCAGTAAAAATCATGTTCCAGGGGATAAAATCCGCTTTTTGGCGGGGTTCCCCTGGTAAAATTCGCATTCCAGAGGCTAAATATCATGTTATTTGGGGTCGCTTCAACCCGCGGACATGAAAAAC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU126007 True 241 lncRNA 0.45 1 1380212 1380452

Neighbor

gene id symbol gene type direction distance location
CI01000020_01375811_01378288 AVPR2L coding upstream 1144 1373164 ~ 1379068 (+)
CI01000020_01341579_01343530 NA coding upstream 36166 1340893 ~ 1344046 (+)
CI01000020_01275836_01316392 ANKS1B coding upstream 63820 1275836 ~ 1316392 (+)
CI01000020_01187688_01253805 NA coding upstream 126202 1187579 ~ 1254010 (+)
CI01000020_01147997_01150696 NA coding upstream 229249 1147545 ~ 1150963 (+)
CI01000020_01383268_01384854 DNAJB9B coding downstream 2816 1383268 ~ 1386041 (+)
CI01000020_01395424_01397266 SPIC coding downstream 14674 1395126 ~ 1397343 (+)
CI01000020_01400705_01401757 NA coding downstream 17844 1398296 ~ 1402082 (+)
CI01000020_01416902_01441420 MYBPC1 coding downstream 36450 1416902 ~ 1441556 (+)
CI01000020_01447228_01456657 CHPT1 coding downstream 65952 1446404 ~ 1457595 (+)
G110891 NA non-coding upstream 300 1379678 ~ 1379912 (+)
G110743 NA non-coding upstream 311328 1057441 ~ 1068884 (+)
G110836 NA non-coding upstream 314047 1027444 ~ 1066165 (+)
G110738 NA non-coding upstream 403579 975669 ~ 976633 (+)
G110908 NA non-coding downstream 6886 1387338 ~ 1387541 (+)
G110909 NA non-coding downstream 7157 1387609 ~ 1387903 (+)
G110897 NA non-coding downstream 87732 1468184 ~ 1476360 (+)
G110928 NA non-coding downstream 98642 1479094 ~ 1479329 (+)
G110940 NA non-coding downstream 134229 1514681 ~ 1516164 (+)
CI01000020_01083614_01106789 PLXNC1 other upstream 293439 1083230 ~ 1107257 (+)
CI01000020_00810993_00815495 CDPF1 other upstream 563702 810899 ~ 816510 (+)
G110589 NA other upstream 1153364 180778 ~ 226848 (+)
G110562 NA other upstream 1332172 30693 ~ 48040 (+)
CI01000020_02444149_02444833 NA other downstream 1063792 2443278 ~ 2444944 (+)
G111183 NA other downstream 1267059 2647511 ~ 2658913 (+)
G112679 NA other downstream 1920719 3301171 ~ 3303730 (+)
G112753 NA other downstream 2333929 3714381 ~ 3733586 (+)
G113050 NA other downstream 3046206 4426658 ~ 4439762 (+)

Expression


Co-expression Network