G110940


Basic Information

Item Value
gene id G110940
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000020
NCBI id null
chromosome length 7209782
location 1514681 ~ 1516164 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU126067
CAAAGGTTTTGGGACGCCTGCCTTTACGTGCACATGAACTTTAATGACATCCCATTCGTAATCCGTAGGGTTTAATATGGAGTTGTCCCACCCTTTGCAGCTATAACAGCCTTAACTCTTCTGGGAAGGCTTTCCACAAGGTTTAGGAGTGTGTTTATGGGAATTTTTGACCATTCTTCTAGAAGCGCATTTGTGAGGTCAGGCAGTGATGTTGGCGAGAAGGCCTGGCTCGCAGTCTCCGCTCTAATTCATCCCAAAGGTGTTCTATCGGGTTGAGATCAGGACTCTGTGCAGGCCAGTCAAGTTCCTCCACACCAAACTCACTCATCCATGTCTTTATGGACCTTGCTCACTGGTGCGCAGTCATGGAACAGGGACAGGTTGGAACAGGAAGGGGCCATCCCCAAACTGTTCCCACAAAGTTGGGAGCATGAAATTGTCCAAAATGTCTTGGTATGCTGAAGCATTAAGAGTTCCTTTCACTGGAACTAAGGGGCCAAGCCCAACCCCTGAAAAACAACCCCACACCATAATTCCCCCTCCACCAAACTTTACACTTGGCACAATGCAGTCAGGCGAGTAACATTCTCCTGGCAACCGCCAAACCCAGACTTGTCCATTGGATTGCCAGACAGAGAAGCGTGATTCGTCACTCCAGAGAACACGTCTCCACTGCTCTAGAGTCCAGTGGCGGCGTGCTTTACACCACTGCATCCGACACTTTGCATTGCACTTGGTGATGTAAGGCTTGGATGCCGCTGCTCGGCCATGGAAACCCATTCCATGAAGCTCTCTACGCACTGTGCAGCTAATCTGAAGGCCACACGAAGTTTGGAGGTCTGTAGCTACTGACTGTGCACTGTGCTCCTCAGCATGTGCTGACGCCGCTCTGTGATTTTCACGTGGCCTACCACTTCATGGCTGAGTTGCTGTTGTTCCCAATTGCTTCAACTTTGTTATGATACCACTAACAGTTGACCGTGGAATATTTAGTAGTGAGGAAATTTTTACGAATGGACTTATTGCACAGGTGGCAACCTATCACGGTACCACAATCGAATTCACTGAGCTCCTGAGAGCGACCCATTCTTTCACAAATGTTTGTAGAAGCAGTCTGTGTGCCTAGGTGCTTGATTTTATACACCTGTGGCCATGGAAGTGATTGGAACCTGAATTCACTGATTTGGAGGG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU126067 True 1191 lncRNA 0.49 2 1514681 1516164

Neighbor

gene id symbol gene type direction distance location
CI01000020_01500660_01504462 KLHL42 coding upstream 9854 1500660 ~ 1504827 (+)
CI01000020_01484806_01488530 NA coding upstream 25666 1484616 ~ 1489015 (+)
CI01000020_01447228_01456657 CHPT1 coding upstream 57086 1446404 ~ 1457595 (+)
CI01000020_01416902_01441420 MYBPC1 coding upstream 73125 1416902 ~ 1441556 (+)
CI01000020_01400705_01401757 NA coding upstream 112599 1398296 ~ 1402082 (+)
CI01000020_01585338_01604278 NA coding downstream 68700 1584864 ~ 1604586 (+)
CI01000020_01608261_01638242 NA coding downstream 91673 1607837 ~ 1638943 (+)
CI01000020_01647763_01658875 PAH coding downstream 131060 1647224 ~ 1659574 (+)
CI01000020_01660231_01665929 PAH, TH2 coding downstream 143867 1660031 ~ 1666074 (+)
CI01000020_01684414_01696762 PARPBP coding downstream 168250 1684414 ~ 1697096 (+)
G110928 NA non-coding upstream 35352 1479094 ~ 1479329 (+)
G110897 NA non-coding upstream 38321 1468184 ~ 1476360 (+)
G110909 NA non-coding upstream 126778 1387609 ~ 1387903 (+)
G110908 NA non-coding upstream 127140 1387338 ~ 1387541 (+)
G110892 NA non-coding upstream 134229 1380212 ~ 1380452 (+)
G110950 NA non-coding downstream 20789 1536953 ~ 1538262 (+)
G110952 NA non-coding downstream 26869 1543033 ~ 1543255 (+)
G110954 NA non-coding downstream 28968 1545132 ~ 1545347 (+)
G110962 NA non-coding downstream 59708 1575872 ~ 1576147 (+)
G110989 NA non-coding downstream 153276 1669440 ~ 1669856 (+)
CI01000020_01375811_01378288 AVPR2L other upstream 136332 1373164 ~ 1379068 (+)
CI01000020_01083614_01106789 PLXNC1 other upstream 427908 1083230 ~ 1107257 (+)
CI01000020_00810993_00815495 CDPF1 other upstream 698171 810899 ~ 816510 (+)
G110589 NA other upstream 1287833 180778 ~ 226848 (+)
G110562 NA other upstream 1466641 30693 ~ 48040 (+)
CI01000020_02444149_02444833 NA other downstream 928080 2443278 ~ 2444944 (+)
G111183 NA other downstream 1131347 2647511 ~ 2658913 (+)
G112679 NA other downstream 1785007 3301171 ~ 3303730 (+)
G112753 NA other downstream 2198217 3714381 ~ 3733586 (+)
G113050 NA other downstream 2910494 4426658 ~ 4439762 (+)

Expression


Co-expression Network