Gene
RNA
| Item | Value |
|---|---|
| gene id | G110950 |
| gene name | NA |
| gene type | non-coding |
| species | grasscarp (Ctenopharyngodon idella) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | CI01000020 |
| NCBI id | null |
| chromosome length | 7209782 |
| location | 1536953 ~ 1538262 (+) |
| genome version | v1_2015/06_NatureGenetics_grasscarp_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU126077 | True | 1075 | lncRNA | 0.35 | 2 | 1536953 | 1538262 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| CI01000020_01500660_01504462 | KLHL42 | coding | upstream | 32126 | 1500660 ~ 1504827 (+) |
| CI01000020_01484806_01488530 | NA | coding | upstream | 47938 | 1484616 ~ 1489015 (+) |
| CI01000020_01447228_01456657 | CHPT1 | coding | upstream | 79358 | 1446404 ~ 1457595 (+) |
| CI01000020_01416902_01441420 | MYBPC1 | coding | upstream | 95397 | 1416902 ~ 1441556 (+) |
| CI01000020_01400705_01401757 | NA | coding | upstream | 134871 | 1398296 ~ 1402082 (+) |
| CI01000020_01585338_01604278 | NA | coding | downstream | 46602 | 1584864 ~ 1604586 (+) |
| CI01000020_01608261_01638242 | NA | coding | downstream | 69575 | 1607837 ~ 1638943 (+) |
| CI01000020_01647763_01658875 | PAH | coding | downstream | 108962 | 1647224 ~ 1659574 (+) |
| CI01000020_01660231_01665929 | PAH, TH2 | coding | downstream | 121769 | 1660031 ~ 1666074 (+) |
| CI01000020_01684414_01696762 | PARPBP | coding | downstream | 146152 | 1684414 ~ 1697096 (+) |
| G110940 | NA | non-coding | upstream | 20789 | 1514681 ~ 1516164 (+) |
| G110928 | NA | non-coding | upstream | 57624 | 1479094 ~ 1479329 (+) |
| G110897 | NA | non-coding | upstream | 60593 | 1468184 ~ 1476360 (+) |
| G110909 | NA | non-coding | upstream | 149050 | 1387609 ~ 1387903 (+) |
| G110908 | NA | non-coding | upstream | 149412 | 1387338 ~ 1387541 (+) |
| G110952 | NA | non-coding | downstream | 4771 | 1543033 ~ 1543255 (+) |
| G110954 | NA | non-coding | downstream | 6870 | 1545132 ~ 1545347 (+) |
| G110962 | NA | non-coding | downstream | 37610 | 1575872 ~ 1576147 (+) |
| G110989 | NA | non-coding | downstream | 131178 | 1669440 ~ 1669856 (+) |
| G110967 | NA | non-coding | downstream | 177233 | 1715495 ~ 1725122 (+) |
| CI01000020_01375811_01378288 | AVPR2L | other | upstream | 158604 | 1373164 ~ 1379068 (+) |
| CI01000020_01083614_01106789 | PLXNC1 | other | upstream | 450180 | 1083230 ~ 1107257 (+) |
| CI01000020_00810993_00815495 | CDPF1 | other | upstream | 720443 | 810899 ~ 816510 (+) |
| G110589 | NA | other | upstream | 1310105 | 180778 ~ 226848 (+) |
| G110562 | NA | other | upstream | 1488913 | 30693 ~ 48040 (+) |
| CI01000020_02444149_02444833 | NA | other | downstream | 905982 | 2443278 ~ 2444944 (+) |
| G111183 | NA | other | downstream | 1109249 | 2647511 ~ 2658913 (+) |
| G112679 | NA | other | downstream | 1762909 | 3301171 ~ 3303730 (+) |
| G112753 | NA | other | downstream | 2176119 | 3714381 ~ 3733586 (+) |
| G113050 | NA | other | downstream | 2888396 | 4426658 ~ 4439762 (+) |
