G110989


Basic Information

Item Value
gene id G110989
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000020
NCBI id null
chromosome length 7209782
location 1669440 ~ 1669856 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU126122
GTGAGAGTATGTGGAAGAGGCTGACATTGATTTCTCCAAGCTATATGCAGCTGGTCCAGCACCAGCCACGTTCAGCGCTACCAAAGCCTCGTTTCAGACCACATTGAACTTATTCAAACAAAACCAGCAGACCAGGAGAGCAGTAGCATGTTATGATTGCGGATGGTGGTGTGCTTCTGGGCTCCAAGAATCATACAGGCTTGTCTTTCGGGCCTGAAAGAGTGTAGGTTCAGTTCTCCCTACTTCTGTATGCACCCGTTTCAATCACACCTTAACACCTAGGCACAATATGACCTACTGTTACAAATGGAGCCCATGCAAAAGTCTCAGGAACTGCAGGGAAACTTCTCCAGGGTTGCTGCACTTCTTGACCAACTAATTTCCATTAAAATTCTCATTAAAAGAATGAAATTCTTG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU126122 True 417 lncRNA 0.45 1 1669440 1669856

Neighbor

gene id symbol gene type direction distance location
CI01000020_01660231_01665929 PAH, TH2 coding upstream 3366 1660031 ~ 1666074 (+)
CI01000020_01647763_01658875 PAH coding upstream 9866 1647224 ~ 1659574 (+)
CI01000020_01608261_01638242 NA coding upstream 30497 1607837 ~ 1638943 (+)
CI01000020_01585338_01604278 NA coding upstream 64854 1584864 ~ 1604586 (+)
CI01000020_01510968_01538886 NRIP2 coding upstream 130310 1509579 ~ 1539130 (+)
CI01000020_01684414_01696762 PARPBP coding downstream 14558 1684414 ~ 1697096 (+)
CI01000020_01745382_01768397 LRMP coding downstream 74900 1744756 ~ 1769019 (+)
CI01000020_01797763_01808798 NA coding downstream 127642 1797498 ~ 1808924 (+)
CI01000020_01947333_02011244 SOX5 coding downstream 277477 1947333 ~ 2011244 (+)
CI01000020_02079089_02081777 STRAP.L, STRAP coding downstream 409233 2079089 ~ 2081850 (+)
G110962 NA non-coding upstream 93293 1575872 ~ 1576147 (+)
G110954 NA non-coding upstream 124093 1545132 ~ 1545347 (+)
G110952 NA non-coding upstream 126185 1543033 ~ 1543255 (+)
G110950 NA non-coding upstream 131178 1536953 ~ 1538262 (+)
G110940 NA non-coding upstream 153276 1514681 ~ 1516164 (+)
G110967 NA non-coding downstream 45639 1715495 ~ 1725122 (+)
G111028 NA non-coding downstream 106138 1775994 ~ 1776484 (+)
G111084 NA non-coding downstream 354814 2024670 ~ 2024915 (+)
G111044 NA non-coding downstream 394198 2064054 ~ 2070761 (+)
G111049 NA non-coding downstream 483944 2153800 ~ 2156087 (+)
CI01000020_01375811_01378288 AVPR2L other upstream 291091 1373164 ~ 1379068 (+)
CI01000020_01083614_01106789 PLXNC1 other upstream 582667 1083230 ~ 1107257 (+)
CI01000020_00810993_00815495 CDPF1 other upstream 852930 810899 ~ 816510 (+)
G110589 NA other upstream 1442592 180778 ~ 226848 (+)
G110562 NA other upstream 1621400 30693 ~ 48040 (+)
CI01000020_02444149_02444833 NA other downstream 774388 2443278 ~ 2444944 (+)
G111183 NA other downstream 977655 2647511 ~ 2658913 (+)
G112679 NA other downstream 1631315 3301171 ~ 3303730 (+)
G112753 NA other downstream 2044525 3714381 ~ 3733586 (+)
G113050 NA other downstream 2756802 4426658 ~ 4439762 (+)

Expression


Co-expression Network