XLOC_008184


Basic Information

Item Value
gene id XLOC_008184
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007125.7
NCBI id CM002898.2
chromosome length 52660232
location 51903159 ~ 51903638 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00016093
GCAAACATTTATTGCTGAGTCCAAAATAAATTAACTGATCAAATTTTACATCAGTAATATCACTATATGTTCATTCAATTTTCTGACATTAACATTTCTAATATGTTCAACAGATTGCTCTCACCATTCAAGCTCATGTAAGGtcaataatGAGAACAGAAGCATAACCACAACCCCCCCTGTAGCCAACCTTTCTGCAAAAACTGGACTACTTTCACTCAACCAGcAAGTTGAAGACAAGTGA

Function

GO:

id name namespace
GO:0048731 system development biological_process
GO:0072359 circulatory system development biological_process
GO:0007275 multicellular organism development biological_process
GO:0048856 anatomical structure development biological_process
GO:0006729 tetrahydrobiopterin biosynthetic process biological_process
GO:0042559 pteridine-containing compound biosynthetic process biological_process
GO:0034312 diol biosynthetic process biological_process
GO:0046146 tetrahydrobiopterin metabolic process biological_process
GO:0008015 blood circulation biological_process
GO:0003013 circulatory system process biological_process
GO:0003015 heart process biological_process
GO:0032501 multicellular organismal process biological_process
GO:0032502 developmental process biological_process
GO:0060538 skeletal muscle organ development biological_process
GO:0060047 heart contraction biological_process

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00016093 True 244 lncRNA 0.35 3 51903159 51903638

Neighbor

gene id symbol gene type direction distance location
XLOC_008183 cplx2 coding downstream 48112 51829317 ~ 51855047 (-)
XLOC_008182 NA coding downstream 65772 51826078 ~ 51837387 (-)
XLOC_008181 CABZ01066915.1 coding downstream 149962 51753080 ~ 51753197 (-)
XLOC_008179 unc5a coding downstream 283701 51164056 ~ 51619458 (-)
XLOC_008180 CABZ01070359.1 coding downstream 629859 51273185 ~ 51273300 (-)
XLOC_008185 CABZ01075745.1 coding upstream 145520 52049158 ~ 52049274 (-)
XLOC_008186 NA coding upstream 286239 52189877 ~ 52191692 (-)
XLOC_008187 polr2b coding upstream 473919 52377557 ~ 52408817 (-)
XLOC_008188 rest coding upstream 514609 52418247 ~ 52433292 (-)
XLOC_008189 exosc3 coding upstream 572882 52476520 ~ 52480661 (-)
XLOC_007641 CU855896.1 misc downstream 49495319 2407736 ~ 2407840 (-)
XLOC_007640 CU855896.2 misc downstream 49495728 2407328 ~ 2407431 (-)
XLOC_007639 CU855896.3 misc downstream 49496087 2406945 ~ 2407072 (-)
XLOC_008176 NA non-coding downstream 916553 50972410 ~ 50986606 (-)
XLOC_008174 NA non-coding downstream 1206377 50693992 ~ 50696782 (-)

Expression


Co-expression Network