XLOC_008186



Basic Information


Item Value
gene id XLOC_008186
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information


Item Value
chromosome id NC_007125.7
NCBI id CM002898.2
chromosome length 52660232
location 52189877 ~ 52191692 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence


>TCONS_00016094
tttgcataacATATTTTACCAATTCCACCTTACTTCCCACATGGGAAAAGTACGACAATTCAACAATGTAAAGAAAGACACAactacaaacaaaaatacaaaataaatatttcagttCGCATTTTGTCACTTTAGAACAGATAAAACCAATCATATAATCACTCTAGTGTCCACAACATCAAAAATCAATCACACTGTGTCTCATTGTcttatttttccccttttagttgTCCTTGAAATactccatagatatatacactagatatcgcatagggaccctgagcatgcgtcaatagcgccgccacattggtacagtgctcccaggacaaatgtcattcaaccgcagtagtcaagacagtgttattacgtgaagatgcaggactttatcgctgtc

Function


GO:

id name namespace
GO:0005737 cytoplasm cellular_component

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA


RNA id representative length rna type GC content exon number start site end site
TCONS_00016094 True 394 lncRNA 0.37 2 52189877 52191692

Neighbor


gene id symbol gene type direction distance location
XLOC_008185 CABZ01075745.1 coding downstream 140603 52049158 ~ 52049274 (-)
XLOC_008184 NA coding downstream 286239 51903159 ~ 51903638 (-)
XLOC_008183 cplx2 coding downstream 334830 51829317 ~ 51855047 (-)
XLOC_008182 NA coding downstream 352490 51826078 ~ 51837387 (-)
XLOC_008181 CABZ01066915.1 coding downstream 436680 51753080 ~ 51753197 (-)
XLOC_008187 polr2b coding upstream 185865 52377557 ~ 52408817 (-)
XLOC_008188 rest coding upstream 226555 52418247 ~ 52433292 (-)
XLOC_008189 exosc3 coding upstream 284828 52476520 ~ 52480661 (-)
XLOC_008190 GPR151 coding upstream 328512 52520204 ~ 52521460 (-)
XLOC_008191 ppp2r2ca coding upstream 331025 52522717 ~ 52552875 (-)
XLOC_007641 CU855896.1 misc downstream 49782037 2407736 ~ 2407840 (-)
XLOC_007640 CU855896.2 misc downstream 49782446 2407328 ~ 2407431 (-)
XLOC_007639 CU855896.3 misc downstream 49782805 2406945 ~ 2407072 (-)
XLOC_008180 CABZ01070359.1 non-coding downstream 916577 51273185 ~ 51273300 (-)

Expression



Co-expression Network