G111331


Basic Information

Item Value
gene id G111331
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000020
NCBI id null
chromosome length 7209782
location 2960859 ~ 2961067 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU126510
TTTTTTTAGACTGTTAAACTGACCCCCATTTCTCTTGCATACACACAAACACAAACTTGAGGACCCAAAAAGGACTCAACATGAGTCGCCCTCATGCTTCGCTTCCTTCTTCCTGTTCTTATAGGCCCCAAACACTCCAATCAATGTTATTGATCATTCCTCAGCAGACACAACCTGTCTGAGGAATCTATCTGCAGGTGTCAGCGGAG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU126510 True 209 lncRNA 0.44 1 2960859 2961067

Neighbor

gene id symbol gene type direction distance location
CI01000020_02865197_02919405 CHCHD3, CHCHD3A coding upstream 41454 2865197 ~ 2919405 (+)
CI01000020_02633932_02637797 MEST coding upstream 322853 2633932 ~ 2638006 (+)
CI01000020_02627995_02631513 NA coding upstream 328989 2627995 ~ 2631870 (+)
CI01000020_02569281_02578301 ATP2B3, ATP2B4, ATP2B1B coding upstream 382018 2568613 ~ 2578841 (+)
CI01000020_02514166_02557008 NA coding upstream 403320 2514105 ~ 2557539 (+)
CI01000020_02983105_03176041 PLXNA4 coding downstream 22038 2983105 ~ 3176041 (+)
CI01000020_03189213_03235363 NA coding downstream 227038 3188105 ~ 3235432 (+)
CI01000020_03264878_03271412 NRF1 coding downstream 303050 3264117 ~ 3272069 (+)
CI01000020_03343617_03348546 KLHDC10 coding downstream 382550 3343617 ~ 3348555 (+)
CI01000020_03379393_03391963 SLC26A5 coding downstream 418326 3379393 ~ 3393102 (+)
G111326 NA non-coding upstream 23482 2937171 ~ 2937377 (+)
G111324 NA non-coding upstream 29169 2931301 ~ 2931690 (+)
G111245 NA non-coding upstream 130659 2796035 ~ 2830200 (+)
G111293 NA non-coding upstream 145239 2815236 ~ 2815620 (+)
G111225 NA non-coding upstream 214811 2705992 ~ 2746048 (+)
G111288 NA non-coding downstream 42313 3003380 ~ 3014892 (+)
G111287 NA non-coding downstream 68860 3029927 ~ 3067810 (+)
G112659 NA non-coding downstream 248373 3209440 ~ 3209712 (+)
G112699 NA non-coding downstream 301395 3262462 ~ 3262672 (+)
G111183 NA other upstream 301946 2647511 ~ 2658913 (+)
CI01000020_02444149_02444833 NA other upstream 511052 2443278 ~ 2444944 (+)
CI01000020_01375811_01378288 AVPR2L other upstream 1582510 1373164 ~ 1379068 (+)
CI01000020_01083614_01106789 PLXNC1 other upstream 1874086 1083230 ~ 1107257 (+)
CI01000020_00810993_00815495 CDPF1 other upstream 2144349 810899 ~ 816510 (+)
G112679 NA other downstream 340104 3301171 ~ 3303730 (+)
G112753 NA other downstream 753314 3714381 ~ 3733586 (+)
G113050 NA other downstream 1465591 4426658 ~ 4439762 (+)
CI01000020_04760482_04774849 NA other downstream 1798945 4760012 ~ 4776083 (+)
CI01000020_04807118_04808453 NA other downstream 1845960 4806765 ~ 4809414 (+)

Expression


Co-expression Network