Gene
RNA
| Item | Value |
|---|---|
| gene id | G111287 |
| gene name | NA |
| gene type | non-coding |
| species | grasscarp (Ctenopharyngodon idella) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | CI01000020 |
| NCBI id | null |
| chromosome length | 7209782 |
| location | 3029927 ~ 3067810 (+) |
| genome version | v1_2015/06_NatureGenetics_grasscarp_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU126458 | True | 37593 | lncRNA | 0.40 | 2 | 3029927 | 3067810 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| CI01000020_02865197_02919405 | CHCHD3, CHCHD3A | coding | upstream | 110522 | 2865197 ~ 2919405 (+) |
| CI01000020_02633932_02637797 | MEST | coding | upstream | 391921 | 2633932 ~ 2638006 (+) |
| CI01000020_02627995_02631513 | NA | coding | upstream | 398057 | 2627995 ~ 2631870 (+) |
| CI01000020_02569281_02578301 | ATP2B3, ATP2B4, ATP2B1B | coding | upstream | 451086 | 2568613 ~ 2578841 (+) |
| CI01000020_02514166_02557008 | NA | coding | upstream | 472388 | 2514105 ~ 2557539 (+) |
| CI01000020_03189213_03235363 | NA | coding | downstream | 120295 | 3188105 ~ 3235432 (+) |
| CI01000020_03264878_03271412 | NRF1 | coding | downstream | 196307 | 3264117 ~ 3272069 (+) |
| CI01000020_03343617_03348546 | KLHDC10 | coding | downstream | 275807 | 3343617 ~ 3348555 (+) |
| CI01000020_03379393_03391963 | SLC26A5 | coding | downstream | 311583 | 3379393 ~ 3393102 (+) |
| CI01000020_03397866_03404516 | PRDM4 | coding | downstream | 330056 | 3397866 ~ 3404710 (+) |
| G111288 | NA | non-coding | upstream | 15035 | 3003380 ~ 3014892 (+) |
| G111331 | NA | non-coding | upstream | 68860 | 2960859 ~ 2961067 (+) |
| G111326 | NA | non-coding | upstream | 92550 | 2937171 ~ 2937377 (+) |
| G111324 | NA | non-coding | upstream | 98237 | 2931301 ~ 2931690 (+) |
| G111245 | NA | non-coding | upstream | 199727 | 2796035 ~ 2830200 (+) |
| G112659 | NA | non-coding | downstream | 141630 | 3209440 ~ 3209712 (+) |
| G112699 | NA | non-coding | downstream | 194652 | 3262462 ~ 3262672 (+) |
| G112702 | NA | non-coding | downstream | 216891 | 3284701 ~ 3284907 (+) |
| G112687 | NA | non-coding | downstream | 235995 | 3303805 ~ 3304620 (+) |
| G111183 | NA | other | upstream | 371014 | 2647511 ~ 2658913 (+) |
| CI01000020_02444149_02444833 | NA | other | upstream | 580120 | 2443278 ~ 2444944 (+) |
| CI01000020_01375811_01378288 | AVPR2L | other | upstream | 1651578 | 1373164 ~ 1379068 (+) |
| CI01000020_01083614_01106789 | PLXNC1 | other | upstream | 1943154 | 1083230 ~ 1107257 (+) |
| CI01000020_00810993_00815495 | CDPF1 | other | upstream | 2213417 | 810899 ~ 816510 (+) |
| G112679 | NA | other | downstream | 233361 | 3301171 ~ 3303730 (+) |
| G112753 | NA | other | downstream | 646571 | 3714381 ~ 3733586 (+) |
| G113050 | NA | other | downstream | 1358848 | 4426658 ~ 4439762 (+) |
| CI01000020_04760482_04774849 | NA | other | downstream | 1692202 | 4760012 ~ 4776083 (+) |
| CI01000020_04807118_04808453 | NA | other | downstream | 1739217 | 4806765 ~ 4809414 (+) |
