Gene
RNA
| Item | Value |
|---|---|
| gene id | G112716 |
| gene name | NA |
| gene type | non-coding |
| species | grasscarp (Ctenopharyngodon idella) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | CI01000020 |
| NCBI id | null |
| chromosome length | 7209782 |
| location | 3322823 ~ 3325360 (+) |
| genome version | v1_2015/06_NatureGenetics_grasscarp_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU128063 | True | 2163 | lncRNA | 0.39 | 2 | 3322823 | 3325360 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| CI01000020_03264878_03271412 | NRF1 | coding | upstream | 50754 | 3264117 ~ 3272069 (+) |
| CI01000020_03189213_03235363 | NA | coding | upstream | 87391 | 3188105 ~ 3235432 (+) |
| CI01000020_02983105_03176041 | PLXNA4 | coding | upstream | 146782 | 2983105 ~ 3176041 (+) |
| CI01000020_02865197_02919405 | CHCHD3, CHCHD3A | coding | upstream | 403418 | 2865197 ~ 2919405 (+) |
| CI01000020_02633932_02637797 | MEST | coding | upstream | 684817 | 2633932 ~ 2638006 (+) |
| CI01000020_03343617_03348546 | KLHDC10 | coding | downstream | 18257 | 3343617 ~ 3348555 (+) |
| CI01000020_03379393_03391963 | SLC26A5 | coding | downstream | 54033 | 3379393 ~ 3393102 (+) |
| CI01000020_03397866_03404516 | PRDM4 | coding | downstream | 72506 | 3397866 ~ 3404710 (+) |
| CI01000020_03405045_03408250 | AKR1B1 | coding | downstream | 79685 | 3405045 ~ 3408273 (+) |
| CI01000020_03623678_03625344 | NA | coding | downstream | 298174 | 3623534 ~ 3626024 (+) |
| G112687 | NA | non-coding | upstream | 18203 | 3303805 ~ 3304620 (+) |
| G112702 | NA | non-coding | upstream | 37916 | 3284701 ~ 3284907 (+) |
| G112699 | NA | non-coding | upstream | 60151 | 3262462 ~ 3262672 (+) |
| G112659 | NA | non-coding | upstream | 113111 | 3209440 ~ 3209712 (+) |
| G112681 | NA | non-coding | downstream | 12209 | 3337569 ~ 3338192 (+) |
| G112779 | NA | non-coding | downstream | 158668 | 3484028 ~ 3484228 (+) |
| G112782 | NA | non-coding | downstream | 161011 | 3486371 ~ 3486626 (+) |
| G112785 | NA | non-coding | downstream | 167417 | 3492777 ~ 3493087 (+) |
| G112786 | NA | non-coding | downstream | 168889 | 3494249 ~ 3494964 (+) |
| G112679 | NA | other | upstream | 19093 | 3301171 ~ 3303730 (+) |
| G111183 | NA | other | upstream | 663910 | 2647511 ~ 2658913 (+) |
| CI01000020_02444149_02444833 | NA | other | upstream | 873016 | 2443278 ~ 2444944 (+) |
| CI01000020_01375811_01378288 | AVPR2L | other | upstream | 1944474 | 1373164 ~ 1379068 (+) |
| CI01000020_01083614_01106789 | PLXNC1 | other | upstream | 2236050 | 1083230 ~ 1107257 (+) |
| G112753 | NA | other | downstream | 389021 | 3714381 ~ 3733586 (+) |
| G113050 | NA | other | downstream | 1101298 | 4426658 ~ 4439762 (+) |
| CI01000020_04760482_04774849 | NA | other | downstream | 1434652 | 4760012 ~ 4776083 (+) |
| CI01000020_04807118_04808453 | NA | other | downstream | 1481667 | 4806765 ~ 4809414 (+) |
| CI01000020_05267250_05267668 | MRPS33 | other | downstream | 1941677 | 5267250 ~ 5268673 (+) |
