Gene
RNA
| Item | Value |
|---|---|
| gene id | G113231 |
| gene name | NA |
| gene type | non-coding |
| species | grasscarp (Ctenopharyngodon idella) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | CI01000020 |
| NCBI id | null |
| chromosome length | 7209782 |
| location | 3452620 ~ 3452938 (-) |
| genome version | v1_2015/06_NatureGenetics_grasscarp_Genome |
| description |
|---|
| PREDICTED: uncharacterized protein LOC107714685 isoform X2 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU128635 | True | 289 | lncRNA | 0.26 | 2 | 3452620 | 3452938 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| CI01000020_03429337_03436635 | KIAA1644 | coding | downstream | 15985 | 3429147 ~ 3436635 (-) |
| CI01000020_03409070_03412685 | AKR1B1 | coding | downstream | 39778 | 3408619 ~ 3412842 (-) |
| CI01000020_03393384_03396967 | BRAFLDRAFT_126283, PSMC2 | coding | downstream | 55653 | 3393384 ~ 3396967 (-) |
| CI01000020_03370073_03375747 | TSPAN33, TSPAN33A | coding | downstream | 76873 | 3369861 ~ 3375747 (-) |
| CI01000020_03362565_03367403 | SMO | coding | downstream | 85061 | 3362376 ~ 3367559 (-) |
| CI01000020_03511151_03514088 | CMASA | coding | upstream | 58138 | 3511076 ~ 3514088 (-) |
| CI01000020_03519363_03521659 | KCNJ8, IRK8 | coding | upstream | 66204 | 3519142 ~ 3521993 (-) |
| CI01000020_03524870_03559211 | ABCC9 | coding | upstream | 71877 | 3524815 ~ 3559804 (-) |
| CI01000020_03620476_03622801 | NA | coding | upstream | 167470 | 3620408 ~ 3623143 (-) |
| CI01000020_03627542_03627865 | NA | coding | upstream | 174554 | 3627492 ~ 3630498 (-) |
| G113160 | NA | non-coding | downstream | 7165 | 3391829 ~ 3445455 (-) |
| CI01000020_03304491_03309596 | UBE2H | non-coding | downstream | 147850 | 3300912 ~ 3310248 (-) |
| G113174 | NA | non-coding | downstream | 227068 | 3225240 ~ 3225552 (-) |
| G113162 | NA | non-coding | downstream | 247615 | 3204773 ~ 3205005 (-) |
| G113139 | NA | non-coding | downstream | 249331 | 3202959 ~ 3203289 (-) |
| G113249 | NA | non-coding | upstream | 19609 | 3472547 ~ 3472806 (-) |
| G113254 | NA | non-coding | upstream | 26407 | 3479345 ~ 3479635 (-) |
| G113256 | NA | non-coding | upstream | 31088 | 3484026 ~ 3484245 (-) |
| G113257 | NA | non-coding | upstream | 34007 | 3486945 ~ 3487299 (-) |
| G113259 | NA | non-coding | upstream | 39809 | 3492747 ~ 3493080 (-) |
| CI01000020_02828968_02849511 | NA | other | downstream | 603102 | 2828763 ~ 2849518 (-) |
| CI01000020_02121873_02122329 | KISS2 | other | downstream | 1330246 | 2121714 ~ 2122619 (-) |
| G112136 | NA | other | downstream | 1331388 | 2040034 ~ 2121232 (-) |
| CI01000020_01463785_01480876 | GNPTAB | other | downstream | 1967642 | 1463771 ~ 1481058 (-) |
| G113375 | NA | other | upstream | 308507 | 3761445 ~ 3847924 (-) |
| G113802 | NA | other | upstream | 1291581 | 4744519 ~ 4746050 (-) |
| G114747 | NA | other | upstream | 2071668 | 5524606 ~ 5525234 (-) |
| CI01000020_05958448_05959900 | NA | other | upstream | 2505513 | 5958221 ~ 5960015 (-) |
| G114926 | NA | other | upstream | 2706372 | 6159310 ~ 6162609 (-) |
