Gene
RNA
| Item | Value |
|---|---|
| gene id | G112769 |
| gene name | NA |
| gene type | non-coding |
| species | grasscarp (Ctenopharyngodon idella) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | CI01000020 |
| NCBI id | null |
| chromosome length | 7209782 |
| location | 3696585 ~ 3697508 (+) |
| genome version | v1_2015/06_NatureGenetics_grasscarp_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU128124 | True | 924 | lncRNA | 0.34 | 1 | 3696585 | 3697508 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| CI01000020_03660304_03682653 | PLXNB2A | coding | upstream | 13550 | 3660304 ~ 3683035 (+) |
| CI01000020_03632947_03634207 | NA | coding | upstream | 62307 | 3632947 ~ 3634278 (+) |
| CI01000020_03623678_03625344 | NA | coding | upstream | 70561 | 3623534 ~ 3626024 (+) |
| CI01000020_03405045_03408250 | AKR1B1 | coding | upstream | 288312 | 3405045 ~ 3408273 (+) |
| CI01000020_03397866_03404516 | PRDM4 | coding | upstream | 291875 | 3397866 ~ 3404710 (+) |
| CI01000020_03761716_03806609 | NELL2B | coding | downstream | 64208 | 3761716 ~ 3806914 (+) |
| CI01000020_03840431_03846507 | TWF1, TWF1B | coding | downstream | 142094 | 3839602 ~ 3847229 (+) |
| CI01000020_03848839_03853256 | PUS7L | coding | downstream | 151331 | 3848839 ~ 3853630 (+) |
| CI01000020_03957225_03966342 | PRICKLE1B, PRICKLE1 | coding | downstream | 259717 | 3957225 ~ 3966942 (+) |
| CI01000020_03985890_03988606 | ZCRB1 | coding | downstream | 288382 | 3985890 ~ 3988936 (+) |
| G112760 | NA | non-coding | upstream | 443 | 3689456 ~ 3696142 (+) |
| G112768 | NA | non-coding | upstream | 140636 | 3555249 ~ 3555949 (+) |
| G112766 | NA | non-coding | upstream | 180080 | 3516132 ~ 3516505 (+) |
| G112790 | NA | non-coding | upstream | 197361 | 3498805 ~ 3499224 (+) |
| G112789 | NA | non-coding | upstream | 199253 | 3497075 ~ 3497332 (+) |
| G112806 | NA | non-coding | downstream | 15724 | 3713232 ~ 3713845 (+) |
| G112819 | NA | non-coding | downstream | 48874 | 3746382 ~ 3746615 (+) |
| G112827 | NA | non-coding | downstream | 60353 | 3757861 ~ 3758199 (+) |
| G112848 | NA | non-coding | downstream | 160250 | 3857758 ~ 3858264 (+) |
| G112861 | NA | non-coding | downstream | 278363 | 3975871 ~ 3985375 (+) |
| G112679 | NA | other | upstream | 392855 | 3301171 ~ 3303730 (+) |
| G111183 | NA | other | upstream | 1037672 | 2647511 ~ 2658913 (+) |
| CI01000020_02444149_02444833 | NA | other | upstream | 1246778 | 2443278 ~ 2444944 (+) |
| CI01000020_01375811_01378288 | AVPR2L | other | upstream | 2318236 | 1373164 ~ 1379068 (+) |
| CI01000020_01083614_01106789 | PLXNC1 | other | upstream | 2609812 | 1083230 ~ 1107257 (+) |
| G112753 | NA | other | downstream | 16873 | 3714381 ~ 3733586 (+) |
| G113050 | NA | other | downstream | 729150 | 4426658 ~ 4439762 (+) |
| CI01000020_04760482_04774849 | NA | other | downstream | 1062504 | 4760012 ~ 4776083 (+) |
| CI01000020_04807118_04808453 | NA | other | downstream | 1109519 | 4806765 ~ 4809414 (+) |
| CI01000020_05267250_05267668 | MRPS33 | other | downstream | 1569529 | 5267250 ~ 5268673 (+) |
