Gene
RNA
| Item | Value |
|---|---|
| gene id | G112827 |
| gene name | NA |
| gene type | non-coding |
| species | grasscarp (Ctenopharyngodon idella) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | CI01000020 |
| NCBI id | null |
| chromosome length | 7209782 |
| location | 3757861 ~ 3758199 (+) |
| genome version | v1_2015/06_NatureGenetics_grasscarp_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU128183 | True | 239 | lncRNA | 0.47 | 2 | 3757861 | 3758199 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| CI01000020_03660304_03682653 | PLXNB2A | coding | upstream | 74826 | 3660304 ~ 3683035 (+) |
| CI01000020_03632947_03634207 | NA | coding | upstream | 123583 | 3632947 ~ 3634278 (+) |
| CI01000020_03623678_03625344 | NA | coding | upstream | 131837 | 3623534 ~ 3626024 (+) |
| CI01000020_03405045_03408250 | AKR1B1 | coding | upstream | 349588 | 3405045 ~ 3408273 (+) |
| CI01000020_03397866_03404516 | PRDM4 | coding | upstream | 353151 | 3397866 ~ 3404710 (+) |
| CI01000020_03761716_03806609 | NELL2B | coding | downstream | 3517 | 3761716 ~ 3806914 (+) |
| CI01000020_03840431_03846507 | TWF1, TWF1B | coding | downstream | 81403 | 3839602 ~ 3847229 (+) |
| CI01000020_03848839_03853256 | PUS7L | coding | downstream | 90640 | 3848839 ~ 3853630 (+) |
| CI01000020_03957225_03966342 | PRICKLE1B, PRICKLE1 | coding | downstream | 199026 | 3957225 ~ 3966942 (+) |
| CI01000020_03985890_03988606 | ZCRB1 | coding | downstream | 227691 | 3985890 ~ 3988936 (+) |
| G112819 | NA | non-coding | upstream | 11246 | 3746382 ~ 3746615 (+) |
| G112806 | NA | non-coding | upstream | 44016 | 3713232 ~ 3713845 (+) |
| G112769 | NA | non-coding | upstream | 60353 | 3696585 ~ 3697508 (+) |
| G112760 | NA | non-coding | upstream | 61719 | 3689456 ~ 3696142 (+) |
| G112768 | NA | non-coding | upstream | 201912 | 3555249 ~ 3555949 (+) |
| G112848 | NA | non-coding | downstream | 99559 | 3857758 ~ 3858264 (+) |
| G112861 | NA | non-coding | downstream | 217672 | 3975871 ~ 3985375 (+) |
| G112897 | NA | non-coding | downstream | 234822 | 3993021 ~ 4051603 (+) |
| G112911 | NA | non-coding | downstream | 301702 | 4059901 ~ 4060168 (+) |
| G112919 | NA | non-coding | downstream | 314223 | 4072422 ~ 4072638 (+) |
| G112753 | NA | other | upstream | 24275 | 3714381 ~ 3733586 (+) |
| G112679 | NA | other | upstream | 454131 | 3301171 ~ 3303730 (+) |
| G111183 | NA | other | upstream | 1098948 | 2647511 ~ 2658913 (+) |
| CI01000020_02444149_02444833 | NA | other | upstream | 1308054 | 2443278 ~ 2444944 (+) |
| CI01000020_01375811_01378288 | AVPR2L | other | upstream | 2379512 | 1373164 ~ 1379068 (+) |
| G113050 | NA | other | downstream | 668459 | 4426658 ~ 4439762 (+) |
| CI01000020_04760482_04774849 | NA | other | downstream | 1001813 | 4760012 ~ 4776083 (+) |
| CI01000020_04807118_04808453 | NA | other | downstream | 1048828 | 4806765 ~ 4809414 (+) |
| CI01000020_05267250_05267668 | MRPS33 | other | downstream | 1508838 | 5267250 ~ 5268673 (+) |
| G113929 | NA | other | downstream | 1864508 | 5622707 ~ 5625232 (+) |
