Gene
RNA
| Item | Value |
|---|---|
| gene id | G112897 |
| gene name | NA |
| gene type | non-coding |
| species | grasscarp (Ctenopharyngodon idella) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | CI01000020 |
| NCBI id | null |
| chromosome length | 7209782 |
| location | 3993021 ~ 4051603 (+) |
| genome version | v1_2015/06_NatureGenetics_grasscarp_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU128259 | True | 1088 | lncRNA | 0.40 | 2 | 3993021 | 4051603 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| CI01000020_03985890_03988606 | ZCRB1 | coding | upstream | 4085 | 3985890 ~ 3988936 (+) |
| CI01000020_03957225_03966342 | PRICKLE1B, PRICKLE1 | coding | upstream | 26079 | 3957225 ~ 3966942 (+) |
| CI01000020_03848839_03853256 | PUS7L | coding | upstream | 139391 | 3848839 ~ 3853630 (+) |
| CI01000020_03840431_03846507 | TWF1, TWF1B | coding | upstream | 145792 | 3839602 ~ 3847229 (+) |
| CI01000020_03761716_03806609 | NELL2B | coding | upstream | 186107 | 3761716 ~ 3806914 (+) |
| CI01000020_04175433_04175851 | AKAP14 | coding | downstream | 123794 | 4175397 ~ 4175851 (+) |
| CI01000020_04186824_04192668 | IRF5 | coding | downstream | 134815 | 4186418 ~ 4192880 (+) |
| CI01000020_04213624_04215676 | OPN1SW, OPN1SW1 | coding | downstream | 161926 | 4213529 ~ 4216493 (+) |
| CI01000020_04226010_04238699 | MDM1 | coding | downstream | 173439 | 4225042 ~ 4238923 (+) |
| CI01000020_04240295_04242117 | NA | coding | downstream | 188588 | 4240191 ~ 4242373 (+) |
| G112861 | NA | non-coding | upstream | 7646 | 3975871 ~ 3985375 (+) |
| G112848 | NA | non-coding | upstream | 134757 | 3857758 ~ 3858264 (+) |
| G112827 | NA | non-coding | upstream | 234822 | 3757861 ~ 3758199 (+) |
| G112819 | NA | non-coding | upstream | 246406 | 3746382 ~ 3746615 (+) |
| G112806 | NA | non-coding | upstream | 279176 | 3713232 ~ 3713845 (+) |
| G112911 | NA | non-coding | downstream | 8298 | 4059901 ~ 4060168 (+) |
| G112919 | NA | non-coding | downstream | 20819 | 4072422 ~ 4072638 (+) |
| G112928 | NA | non-coding | downstream | 39602 | 4091205 ~ 4100700 (+) |
| G112941 | NA | non-coding | downstream | 51702 | 4103305 ~ 4159120 (+) |
| G112955 | NA | non-coding | downstream | 83541 | 4135144 ~ 4136916 (+) |
| G112753 | NA | other | upstream | 259435 | 3714381 ~ 3733586 (+) |
| G112679 | NA | other | upstream | 689291 | 3301171 ~ 3303730 (+) |
| G111183 | NA | other | upstream | 1334108 | 2647511 ~ 2658913 (+) |
| CI01000020_02444149_02444833 | NA | other | upstream | 1543214 | 2443278 ~ 2444944 (+) |
| CI01000020_01375811_01378288 | AVPR2L | other | upstream | 2614672 | 1373164 ~ 1379068 (+) |
| G113050 | NA | other | downstream | 375055 | 4426658 ~ 4439762 (+) |
| CI01000020_04760482_04774849 | NA | other | downstream | 708409 | 4760012 ~ 4776083 (+) |
| CI01000020_04807118_04808453 | NA | other | downstream | 755424 | 4806765 ~ 4809414 (+) |
| CI01000020_05267250_05267668 | MRPS33 | other | downstream | 1215434 | 5267250 ~ 5268673 (+) |
| G113929 | NA | other | downstream | 1571104 | 5622707 ~ 5625232 (+) |
