Gene
RNA
| Item | Value |
|---|---|
| gene id | G112915 |
| gene name | NA |
| gene type | non-coding |
| species | grasscarp (Ctenopharyngodon idella) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | CI01000020 |
| NCBI id | null |
| chromosome length | 7209782 |
| location | 4170645 ~ 4171529 (+) |
| genome version | v1_2015/06_NatureGenetics_grasscarp_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU128277 | True | 541 | lncRNA | 0.49 | 4 | 4170645 | 4171529 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| CI01000020_04005946_04011338 | NA | coding | upstream | 159162 | 4005739 ~ 4011483 (+) |
| CI01000020_03989813_04001907 | YAF2 | coding | upstream | 167823 | 3989813 ~ 4002822 (+) |
| CI01000020_03985890_03988606 | ZCRB1 | coding | upstream | 181709 | 3985890 ~ 3988936 (+) |
| CI01000020_03957225_03966342 | PRICKLE1B, PRICKLE1 | coding | upstream | 203703 | 3957225 ~ 3966942 (+) |
| CI01000020_03848839_03853256 | PUS7L | coding | upstream | 317015 | 3848839 ~ 3853630 (+) |
| CI01000020_04175433_04175851 | AKAP14 | coding | downstream | 3868 | 4175397 ~ 4175851 (+) |
| CI01000020_04186824_04192668 | IRF5 | coding | downstream | 14889 | 4186418 ~ 4192880 (+) |
| CI01000020_04213624_04215676 | OPN1SW, OPN1SW1 | coding | downstream | 42000 | 4213529 ~ 4216493 (+) |
| CI01000020_04226010_04238699 | MDM1 | coding | downstream | 53513 | 4225042 ~ 4238923 (+) |
| CI01000020_04240295_04242117 | NA | coding | downstream | 68662 | 4240191 ~ 4242373 (+) |
| G112941 | NA | non-coding | upstream | 11525 | 4103305 ~ 4159120 (+) |
| G112955 | NA | non-coding | upstream | 33729 | 4135144 ~ 4136916 (+) |
| G112928 | NA | non-coding | upstream | 69945 | 4091205 ~ 4100700 (+) |
| G112919 | NA | non-coding | upstream | 98007 | 4072422 ~ 4072638 (+) |
| G112911 | NA | non-coding | upstream | 110477 | 4059901 ~ 4060168 (+) |
| G112980 | NA | non-coding | downstream | 38098 | 4209627 ~ 4210089 (+) |
| G112982 | NA | non-coding | downstream | 39137 | 4210666 ~ 4210901 (+) |
| G112984 | NA | non-coding | downstream | 41149 | 4212678 ~ 4212921 (+) |
| G112935 | NA | non-coding | downstream | 51136 | 4222665 ~ 4223524 (+) |
| G113063 | NA | non-coding | downstream | 200362 | 4371891 ~ 4372234 (+) |
| G112753 | NA | other | upstream | 437059 | 3714381 ~ 3733586 (+) |
| G112679 | NA | other | upstream | 866915 | 3301171 ~ 3303730 (+) |
| G111183 | NA | other | upstream | 1511732 | 2647511 ~ 2658913 (+) |
| CI01000020_02444149_02444833 | NA | other | upstream | 1720838 | 2443278 ~ 2444944 (+) |
| CI01000020_01375811_01378288 | AVPR2L | other | upstream | 2792296 | 1373164 ~ 1379068 (+) |
| G113050 | NA | other | downstream | 255129 | 4426658 ~ 4439762 (+) |
| CI01000020_04760482_04774849 | NA | other | downstream | 588483 | 4760012 ~ 4776083 (+) |
| CI01000020_04807118_04808453 | NA | other | downstream | 635498 | 4806765 ~ 4809414 (+) |
| CI01000020_05267250_05267668 | MRPS33 | other | downstream | 1095508 | 5267250 ~ 5268673 (+) |
| G113929 | NA | other | downstream | 1451178 | 5622707 ~ 5625232 (+) |
