G112984


Basic Information

Item Value
gene id G112984
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000020
NCBI id null
chromosome length 7209782
location 4212678 ~ 4212921 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU128367
TGTCAACCAAGATGCCCCCAAAAAACAATAGCTGCAGAACATCAACACATTATGTTAAACTGAAGATTCAAGATATGATTCCATTGATTCATTATAAACCTAAAAACCTTAATTTAAAGAGAGTGGAAAGCAAAATGCAGGTCAAATGTGGACCAATATGTGAGTTCGAACAATTGCTTTATACAATACAGATTGTTTCAAAGCAGCTTCACAGTGATAAACAGGGATATAACAGTGTGTCAAT

Function

NR:

description
PREDICTED: obscurin-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU128367 True 244 lncRNA 0.34 1 4212678 4212921

Neighbor

gene id symbol gene type direction distance location
CI01000020_04186824_04192668 IRF5 coding upstream 19798 4186418 ~ 4192880 (+)
CI01000020_04175433_04175851 AKAP14 coding upstream 36827 4175397 ~ 4175851 (+)
CI01000020_04005946_04011338 NA coding upstream 201195 4005739 ~ 4011483 (+)
CI01000020_03989813_04001907 YAF2 coding upstream 209856 3989813 ~ 4002822 (+)
CI01000020_03985890_03988606 ZCRB1 coding upstream 223742 3985890 ~ 3988936 (+)
CI01000020_04213624_04215676 OPN1SW, OPN1SW1 coding downstream 608 4213529 ~ 4216493 (+)
CI01000020_04226010_04238699 MDM1 coding downstream 12121 4225042 ~ 4238923 (+)
CI01000020_04240295_04242117 NA coding downstream 27270 4240191 ~ 4242373 (+)
CI01000020_04266512_04267515 NA coding downstream 53475 4266396 ~ 4267780 (+)
CI01000020_04273916_04275725 IFNG1-2 coding downstream 60817 4273738 ~ 4276107 (+)
G112982 NA non-coding upstream 1777 4210666 ~ 4210901 (+)
G112980 NA non-coding upstream 2589 4209627 ~ 4210089 (+)
G112915 NA non-coding upstream 41149 4170645 ~ 4171529 (+)
G112941 NA non-coding upstream 53558 4103305 ~ 4159120 (+)
G112955 NA non-coding upstream 75762 4135144 ~ 4136916 (+)
G112935 NA non-coding downstream 9744 4222665 ~ 4223524 (+)
G113063 NA non-coding downstream 158970 4371891 ~ 4372234 (+)
G113065 NA non-coding downstream 168100 4381021 ~ 4381313 (+)
G113067 NA non-coding downstream 190262 4403183 ~ 4408822 (+)
G113048 NA non-coding downstream 196591 4409512 ~ 4415205 (+)
G112753 NA other upstream 479092 3714381 ~ 3733586 (+)
G112679 NA other upstream 908948 3301171 ~ 3303730 (+)
G111183 NA other upstream 1553765 2647511 ~ 2658913 (+)
CI01000020_02444149_02444833 NA other upstream 1762871 2443278 ~ 2444944 (+)
CI01000020_01375811_01378288 AVPR2L other upstream 2834329 1373164 ~ 1379068 (+)
G113050 NA other downstream 213737 4426658 ~ 4439762 (+)
CI01000020_04760482_04774849 NA other downstream 547091 4760012 ~ 4776083 (+)
CI01000020_04807118_04808453 NA other downstream 594106 4806765 ~ 4809414 (+)
CI01000020_05267250_05267668 MRPS33 other downstream 1054116 5267250 ~ 5268673 (+)
G113929 NA other downstream 1409786 5622707 ~ 5625232 (+)

Expression


Co-expression Network