G113970


Basic Information

Item Value
gene id G113970
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000020
NCBI id null
chromosome length 7209782
location 5098142 ~ 5098363 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU129461
AAATGTTTAAACTGAGAAAATGTATCATTTTAAGGGAAAAATAAGTTGATTTTAAATTTCATGGCATCAACACATCTCAAAAAAGTTGGGACAAGGCCATGTTTACCACTGTGTGGCATCCCATCTTCTTTTTATAACAGTCTGCAAACGTCTGGGGACTGAGGAGACAAGTTGCTCAAGTTTAGGAATAGGAATGTTGTCCCATTCTTGTCTAATACAGGN

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU129461 True 222 lncRNA 0.36 1 5098142 5098363

Neighbor

gene id symbol gene type direction distance location
CI01000020_05091059_05093805 RERGL, RERGLA coding upstream 3348 5091059 ~ 5094794 (+)
CI01000020_05038237_05069897 NA coding upstream 27829 5037139 ~ 5070313 (+)
CI01000020_05023157_05024184 NA coding upstream 73849 5023157 ~ 5024293 (+)
CI01000020_04926506_04934038 NA coding upstream 163900 4925555 ~ 4934242 (+)
CI01000020_04900806_04906259 NA coding upstream 190548 4900157 ~ 4907594 (+)
CI01000020_05108357_05112394 NA coding downstream 9916 5108279 ~ 5112552 (+)
CI01000020_05132989_05135436 NA coding downstream 34114 5132477 ~ 5135458 (+)
CI01000020_05143320_05161129 CNOT4B coding downstream 44810 5143173 ~ 5162759 (+)
CI01000020_05267250_05267668 MRPS33 coding downstream 168887 5267250 ~ 5268673 (+)
CI01000020_05269653_05286461 BRAF coding downstream 171290 5269653 ~ 5287374 (+)
G113058 NA non-coding upstream 154251 4940411 ~ 4943891 (+)
G113102 NA non-coding upstream 183871 4914021 ~ 4914271 (+)
G113099 NA non-coding upstream 194859 4902830 ~ 4903283 (+)
G113098 NA non-coding upstream 195458 4902092 ~ 4902684 (+)
G113975 NA non-coding downstream 80948 5179311 ~ 5200382 (+)
G113955 NA non-coding downstream 196618 5294981 ~ 5299565 (+)
CI01000020_05490931_05500137 NA non-coding downstream 395258 5490931 ~ 5500137 (+)
G113953 NA non-coding downstream 405601 5503964 ~ 5506516 (+)
G113932 NA non-coding downstream 468029 5566392 ~ 5622606 (+)
CI01000020_04807118_04808453 NA other upstream 274356 4806765 ~ 4809414 (+)
CI01000020_04760482_04774849 NA other upstream 304881 4760012 ~ 4776083 (+)
G113050 NA other upstream 658380 4426658 ~ 4439762 (+)
G112753 NA other upstream 1364556 3714381 ~ 3733586 (+)
G112679 NA other upstream 1794412 3301171 ~ 3303730 (+)
G113929 NA other downstream 524344 5622707 ~ 5625232 (+)
G114094 NA other downstream 704689 5803052 ~ 5805718 (+)
CI01000020_05960777_05981596 NA other downstream 881398 5960777 ~ 5982298 (+)
G114382 NA other downstream 1493861 6592224 ~ 6593564 (+)

Expression


Co-expression Network