XLOC_000082 (CABZ01075319.1)


Basic Information

Item Value
gene id XLOC_000082
gene name CABZ01075319.1
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007112.7
NCBI id CM002885.2
chromosome length 59578282
location 7092273 ~ 7115914 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00000155
TTCACCCTCTTGATCTGCTTTCTGTTCTCGTAGCAAATAAAGTTTACCACTAAGATTGCTTCCCGTTTCCATGGCTTGCATCCACGCACCGTGCGCTCGCCACCGATCTGTAAATGTGGAGGAGCGAAGGCAAGAGGCTCATTACTATCTCTGGCTGTCTCTGAGCCTGGAGGGAG
>TCONS_00000156
TTCACCCTCTTGATCTGCTTTCTGTTCTCGTAGCAAATAAAGTTTACCACTAAGATTGCTTCCCGTTTCCATGGCTTGCATCCACGCACCGTGCGCTCGCCACCGATCTGTAAATGTGGAGGAGCGAAGGCAAGAGAATGCACTCTAAAGGTCAGTATCAGAGGCCAGAATGTCCAGAAGAAGTCTAAATTGTAACTTTTCATCCAATTCAAAAGCCACGCCATTACTCGAGAAAACTTCTTCTGTGTTGGACGGCTCAAAAACATCAGTGTTTCATTCTCCACAGCACGCTCAGCTCAGCAACGCAACCGTGTGCGTCTTATAAACACTAACACGACGAGCAAGGAGAGATATCAAGAGAACCGTGAACAAAAAAAGATGCTACCCTGAGAAAGCATCCGAAAGTGACTGGGATATGCTGCAAATGGAATTAAAATGAATACTGATGTAGTGTATCGCTTTTGGAACATTCTACGAAGGCTTGTATGAAAACTGAAAATACAAAATGGTTTCAAGGAACACATTTGTACTGCAGGCTGACACTTCAACAGGCTTTTACAAGGGCTTATCTAAATGGTAGGCATTAAAAACCCAGGTAAACAAGACGAAACTTGCTGCAAAACACGCTGGAATgaggattttaaacattttcttatTATCCGTCTTTGTCTGGTTGGCC

Function

GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDARG00000117465

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00000155 False 176 lncRNA 0.51 3 7092273 7095474
TCONS_00000156 True 679 lncRNA 0.43 4 7092273 7115914

Neighbor

gene id symbol gene type direction distance location
XLOC_000081 CU929161.1 coding upstream 28330 7063837 ~ 7063943 (+)
XLOC_000080 NA coding upstream 102246 6956913 ~ 6990027 (+)
XLOC_000079 erbb4a coding upstream 166866 6817292 ~ 6925407 (+)
XLOC_000078 CU302223.1 coding upstream 304469 6787690 ~ 6787804 (+)
XLOC_000077 NA coding upstream 331343 6759183 ~ 6760930 (+)
XLOC_000083 ERBB4 coding downstream 73942 7189856 ~ 7448795 (+)
XLOC_000084 NA coding downstream 396615 7512529 ~ 7512762 (+)
XLOC_000085 lancl1 coding downstream 401535 7517449 ~ 7554463 (+)
XLOC_000086 pcnp coding downstream 441051 7556965 ~ 7561222 (+)
XLOC_000087 NA coding downstream 556207 7672121 ~ 7674229 (+)
XLOC_000076 NA non-coding upstream 423934 6665033 ~ 6668339 (+)
XLOC_000097 NA non-coding downstream 1457863 8573777 ~ 8575057 (+)
XLOC_000098 AL928650.2 non-coding downstream 1459393 8575307 ~ 8577274 (+)
XLOC_000100 NA non-coding downstream 1471316 8587230 ~ 8590636 (+)

Expression


Co-expression Network