G114084


Basic Information

Item Value
gene id G114084
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000020
NCBI id null
chromosome length 7209782
location 5783057 ~ 5783281 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU129576
ATTAAATGAAATGAGTTCGTTTCACTCAAATAATAATGAAAGTTCATTGTGCTTAATAGAAAAAAGTTGCATGAACTCAAAATTTCATTGAAGTAAGCTGAACTTAATATTATTGAGTTTCAGCAGATTTCAAATTCCCAGCATGCTTTGCATCAGACTGTATAAGGAAAATAAATGTTAAAATTAAGTGTAGTTTGTGTGTTTTTGCACAAGATTAACATAGGG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU129576 True 225 lncRNA 0.29 1 5783057 5783281

Neighbor

gene id symbol gene type direction distance location
CI01000020_05651021_05656758 NET1 coding upstream 126153 5650779 ~ 5656904 (+)
CI01000020_05636849_05648400 NA coding upstream 134635 5635351 ~ 5648422 (+)
CI01000020_05569133_05573180 NA coding upstream 209250 5568383 ~ 5573807 (+)
CI01000020_05536783_05538245 NA coding upstream 244671 5536783 ~ 5538386 (+)
CI01000020_05514885_05515490 NA coding upstream 267362 5514885 ~ 5515695 (+)
CI01000020_05816151_05820574 NA coding downstream 32382 5815663 ~ 5820886 (+)
CI01000020_05941404_05941840 NA coding downstream 158123 5941404 ~ 5941885 (+)
CI01000020_05942995_05951650 PRMT8B, PRMT8 coding downstream 158645 5941926 ~ 5952403 (+)
CI01000020_05960777_05981596 NA coding downstream 177496 5960777 ~ 5982298 (+)
CI01000020_05988468_05989551 NA coding downstream 204970 5988251 ~ 5989553 (+)
G113915 NA non-coding upstream 65915 5715663 ~ 5717142 (+)
G114070 NA non-coding upstream 72147 5710643 ~ 5710910 (+)
G114060 NA non-coding upstream 114200 5668649 ~ 5668857 (+)
G113924 NA non-coding upstream 155434 5625923 ~ 5627623 (+)
G113932 NA non-coding upstream 160451 5566392 ~ 5622606 (+)
G114085 NA non-coding downstream 235 5783516 ~ 5783743 (+)
G114117 NA non-coding downstream 64272 5847553 ~ 5847781 (+)
G114127 NA non-coding downstream 112346 5895627 ~ 5895917 (+)
G114168 NA non-coding downstream 151231 5934512 ~ 5975712 (+)
G114153 NA non-coding downstream 204110 5987391 ~ 5987951 (+)
G113929 NA other upstream 157825 5622707 ~ 5625232 (+)
CI01000020_05267250_05267668 MRPS33 other upstream 514384 5267250 ~ 5268673 (+)
CI01000020_04807118_04808453 NA other upstream 959271 4806765 ~ 4809414 (+)
CI01000020_04760482_04774849 NA other upstream 989796 4760012 ~ 4776083 (+)
G113050 NA other upstream 1343295 4426658 ~ 4439762 (+)
G114094 NA other downstream 19771 5803052 ~ 5805718 (+)
G114382 NA other downstream 808943 6592224 ~ 6593564 (+)
G114389 NA other downstream 815065 6598346 ~ 6600180 (+)
G114388 NA other downstream 840986 6617328 ~ 6644816 (+)

Expression


Co-expression Network