G114085


Basic Information

Item Value
gene id G114085
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000020
NCBI id null
chromosome length 7209782
location 5783516 ~ 5783743 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU129577
TGCCATTAGAGATGCACAGATTCAGGTAGGCTAATTCACATATTCTGCTTATTCTCTCTCTCTCTCTCTCTCTCTCTTTAACTGCGTTAATAACTGTATCAACGGTATTATTCTGCTATCAAGGCTCAAGCCTTTGTTACTAGTTCAGAAATGACGTTTTGGAATTAGCAACGGAGGCTTGGGATGAGATGCGTAAGAAATTAATCCCACACACAAGAGTGTTTTAAG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU129577 True 228 lncRNA 0.39 1 5783516 5783743

Neighbor

gene id symbol gene type direction distance location
CI01000020_05651021_05656758 NET1 coding upstream 126612 5650779 ~ 5656904 (+)
CI01000020_05636849_05648400 NA coding upstream 135094 5635351 ~ 5648422 (+)
CI01000020_05569133_05573180 NA coding upstream 209709 5568383 ~ 5573807 (+)
CI01000020_05536783_05538245 NA coding upstream 245130 5536783 ~ 5538386 (+)
CI01000020_05514885_05515490 NA coding upstream 267821 5514885 ~ 5515695 (+)
CI01000020_05816151_05820574 NA coding downstream 31920 5815663 ~ 5820886 (+)
CI01000020_05941404_05941840 NA coding downstream 157661 5941404 ~ 5941885 (+)
CI01000020_05942995_05951650 PRMT8B, PRMT8 coding downstream 158183 5941926 ~ 5952403 (+)
CI01000020_05960777_05981596 NA coding downstream 177034 5960777 ~ 5982298 (+)
CI01000020_05988468_05989551 NA coding downstream 204508 5988251 ~ 5989553 (+)
G114084 NA non-coding upstream 235 5783057 ~ 5783281 (+)
G113915 NA non-coding upstream 66374 5715663 ~ 5717142 (+)
G114070 NA non-coding upstream 72606 5710643 ~ 5710910 (+)
G114060 NA non-coding upstream 114659 5668649 ~ 5668857 (+)
G113924 NA non-coding upstream 155893 5625923 ~ 5627623 (+)
G114117 NA non-coding downstream 63810 5847553 ~ 5847781 (+)
G114127 NA non-coding downstream 111884 5895627 ~ 5895917 (+)
G114168 NA non-coding downstream 150769 5934512 ~ 5975712 (+)
G114153 NA non-coding downstream 203648 5987391 ~ 5987951 (+)
G114151 NA non-coding downstream 229212 6012955 ~ 6013436 (+)
G113929 NA other upstream 158284 5622707 ~ 5625232 (+)
CI01000020_05267250_05267668 MRPS33 other upstream 514843 5267250 ~ 5268673 (+)
CI01000020_04807118_04808453 NA other upstream 959730 4806765 ~ 4809414 (+)
CI01000020_04760482_04774849 NA other upstream 990255 4760012 ~ 4776083 (+)
G113050 NA other upstream 1343754 4426658 ~ 4439762 (+)
G114094 NA other downstream 19309 5803052 ~ 5805718 (+)
G114382 NA other downstream 808481 6592224 ~ 6593564 (+)
G114389 NA other downstream 814603 6598346 ~ 6600180 (+)
G114388 NA other downstream 840524 6617328 ~ 6644816 (+)

Expression


Co-expression Network