G114117


Basic Information

Item Value
gene id G114117
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000020
NCBI id null
chromosome length 7209782
location 5847553 ~ 5847781 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU129609
TTGCAGCTATAACAGCCTCAACTCTTCTGGGAAGGCTTTTCACAAGGTTTAGGAGTGTGTTTATGGGAATTTTTGACCATTCTTCTAGAAGCGCATTTGTGAGGTCGGGCACTGATGTTGGCGAGAAGGCCTGGCTCATAGTCACCGCTCTAATTCATCCCAAAGGTATTCTATCGGGTTGAGGTCAGGACTCTGTGCAGGCCAGTCAAGTTCCTCCACACCAAACTCG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU129609 True 229 lncRNA 0.48 1 5847553 5847781

Neighbor

gene id symbol gene type direction distance location
CI01000020_05816151_05820574 NA coding upstream 26667 5815663 ~ 5820886 (+)
CI01000020_05651021_05656758 NET1 coding upstream 190649 5650779 ~ 5656904 (+)
CI01000020_05636849_05648400 NA coding upstream 199131 5635351 ~ 5648422 (+)
CI01000020_05569133_05573180 NA coding upstream 273746 5568383 ~ 5573807 (+)
CI01000020_05536783_05538245 NA coding upstream 309167 5536783 ~ 5538386 (+)
CI01000020_05941404_05941840 NA coding downstream 93623 5941404 ~ 5941885 (+)
CI01000020_05942995_05951650 PRMT8B, PRMT8 coding downstream 94145 5941926 ~ 5952403 (+)
CI01000020_05960777_05981596 NA coding downstream 112996 5960777 ~ 5982298 (+)
CI01000020_05988468_05989551 NA coding downstream 140470 5988251 ~ 5989553 (+)
CI01000020_06000788_06005009 NA coding downstream 152946 6000727 ~ 6005136 (+)
G114085 NA non-coding upstream 63810 5783516 ~ 5783743 (+)
G114084 NA non-coding upstream 64272 5783057 ~ 5783281 (+)
G113915 NA non-coding upstream 130411 5715663 ~ 5717142 (+)
G114070 NA non-coding upstream 136643 5710643 ~ 5710910 (+)
G114060 NA non-coding upstream 178696 5668649 ~ 5668857 (+)
G114127 NA non-coding downstream 47846 5895627 ~ 5895917 (+)
G114168 NA non-coding downstream 86731 5934512 ~ 5975712 (+)
G114153 NA non-coding downstream 139610 5987391 ~ 5987951 (+)
G114151 NA non-coding downstream 165174 6012955 ~ 6013436 (+)
G114200 NA non-coding downstream 222323 6070104 ~ 6070316 (+)
G114094 NA other upstream 41835 5803052 ~ 5805718 (+)
G113929 NA other upstream 222321 5622707 ~ 5625232 (+)
CI01000020_05267250_05267668 MRPS33 other upstream 578880 5267250 ~ 5268673 (+)
CI01000020_04807118_04808453 NA other upstream 1023767 4806765 ~ 4809414 (+)
CI01000020_04760482_04774849 NA other upstream 1054292 4760012 ~ 4776083 (+)
G114382 NA other downstream 744443 6592224 ~ 6593564 (+)
G114389 NA other downstream 750565 6598346 ~ 6600180 (+)
G114388 NA other downstream 776486 6617328 ~ 6644816 (+)
CI01000020_06769551_06772924 NA other downstream 914106 6769310 ~ 6774074 (+)

Expression


Co-expression Network