G114153


Basic Information

Item Value
gene id G114153
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000020
NCBI id null
chromosome length 7209782
location 5987391 ~ 5987951 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU129653
GAATGAACCCATCAAACCGTTCTGCGAATCTGACATCGCTTGTTCTGATTCTAAACAACACAAAATATTCTGAATCTGATTTAAAATGTCTGTAGGTTGGTACTCGGACATGGATAACATTTTACTGAACAAATTGGTTGTCAGCTCGTTCGTCTCATATACTTTTACTGCCACCTTCAGGATTAAATTGATATTGTAGTATTGACACTCGTACAGGTGTAGCTGCAAGCAAACTTGTACAGCTACAAATGTTTTAGATATAATGGCACTTATGCCAGATGAATATATGTGGAACAGAAACCAATGTTTATTTACAAATGTGGTCAGAAACTTGTCTGCTTGTTGTNCACAACAAGTCCAGTTCATTTAAAAATGTATTAACATACTGTTAATTGTGCTCTTTGTTAGAATATTGTGACATTGTAGTAAAATACACCTAATATTATACACATCTGTCCCAAA

Function

NR:

description
PREDICTED: collagen alpha-2(VI) chain isoform X2

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU129653 True 462 lncRNA 0.34 2 5987391 5987951

Neighbor

gene id symbol gene type direction distance location
CI01000020_05960777_05981596 NA coding upstream 5093 5960777 ~ 5982298 (+)
CI01000020_05942995_05951650 PRMT8B, PRMT8 coding upstream 34988 5941926 ~ 5952403 (+)
CI01000020_05941404_05941840 NA coding upstream 45506 5941404 ~ 5941885 (+)
CI01000020_05816151_05820574 NA coding upstream 166505 5815663 ~ 5820886 (+)
CI01000020_05651021_05656758 NET1 coding upstream 330487 5650779 ~ 5656904 (+)
CI01000020_05988468_05989551 NA coding downstream 300 5988251 ~ 5989553 (+)
CI01000020_06000788_06005009 NA coding downstream 12776 6000727 ~ 6005136 (+)
CI01000020_06035989_06042016 TMTC2A coding downstream 48038 6035989 ~ 6042020 (+)
CI01000020_06122192_06132967 PPFIBP1A coding downstream 134241 6122192 ~ 6133643 (+)
CI01000020_06272024_06286697 NA coding downstream 284073 6272024 ~ 6286956 (+)
G114168 NA non-coding upstream 11679 5934512 ~ 5975712 (+)
G114127 NA non-coding upstream 91474 5895627 ~ 5895917 (+)
G114117 NA non-coding upstream 139610 5847553 ~ 5847781 (+)
G114085 NA non-coding upstream 203648 5783516 ~ 5783743 (+)
G114084 NA non-coding upstream 204110 5783057 ~ 5783281 (+)
G114151 NA non-coding downstream 25004 6012955 ~ 6013436 (+)
G114200 NA non-coding downstream 82153 6070104 ~ 6070316 (+)
G114216 NA non-coding downstream 108693 6096644 ~ 6096879 (+)
G114217 NA non-coding downstream 109540 6097491 ~ 6097716 (+)
G114161 NA non-coding downstream 146579 6134530 ~ 6135279 (+)
G114094 NA other upstream 181673 5803052 ~ 5805718 (+)
G113929 NA other upstream 362159 5622707 ~ 5625232 (+)
CI01000020_05267250_05267668 MRPS33 other upstream 718718 5267250 ~ 5268673 (+)
CI01000020_04807118_04808453 NA other upstream 1163605 4806765 ~ 4809414 (+)
G114382 NA other downstream 604273 6592224 ~ 6593564 (+)
G114389 NA other downstream 610395 6598346 ~ 6600180 (+)
G114388 NA other downstream 636316 6617328 ~ 6644816 (+)
CI01000020_06769551_06772924 NA other downstream 773936 6769310 ~ 6774074 (+)
G114413 NA other downstream 815597 6803548 ~ 6808718 (+)

Expression


Co-expression Network