G114151


Basic Information

Item Value
gene id G114151
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000020
NCBI id null
chromosome length 7209782
location 6012955 ~ 6013436 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU129651
TTGGCGGTTTGACACGTGATCCGAATCATGATTCAACACGCTGATTCATTACGCTCCTAATTCAGATGTTTTGTTGTAAATTTAAAAGTAATATGTAACTTTACTAGTTACTTGAAAAAAGTAATCTGATGACCTAACTTGCATTACTTGTAATGCGTTACCCCCAACACTGTGCATGGCAGAAAAAAGTCTTTATGTTGGAAACAAAAAGACTTGTTTTGTCAGCTTAATTAATGCAGCTGTCAAATATTCTGTTGGGAAACATTTAGAATGCTATTAATTTAACTGACCATCTTAATTTGTTGAATTACGTTATGGAAAATCCACAGAGGTGTTTGTATATTCTACCTTTATCAGATCATTGTTGTAAATTGTGTGATTAAAAGCATTGCATCTGCACATATTTTCAAACATGAAAATGTCAAATACCATTTTTCCAATCAAAAAGAGAGGATGAAAAACAAAATAAAAAACATTGCCAC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU129651 True 482 lncRNA 0.32 1 6012955 6013436

Neighbor

gene id symbol gene type direction distance location
CI01000020_06000788_06005009 NA coding upstream 7819 6000727 ~ 6005136 (+)
CI01000020_05988468_05989551 NA coding upstream 23402 5988251 ~ 5989553 (+)
CI01000020_05960777_05981596 NA coding upstream 30657 5960777 ~ 5982298 (+)
CI01000020_05942995_05951650 PRMT8B, PRMT8 coding upstream 60552 5941926 ~ 5952403 (+)
CI01000020_05941404_05941840 NA coding upstream 71070 5941404 ~ 5941885 (+)
CI01000020_06035989_06042016 TMTC2A coding downstream 22553 6035989 ~ 6042020 (+)
CI01000020_06122192_06132967 PPFIBP1A coding downstream 108756 6122192 ~ 6133643 (+)
CI01000020_06272024_06286697 NA coding downstream 258588 6272024 ~ 6286956 (+)
CI01000020_06652576_06656275 NA coding downstream 639140 6652576 ~ 6656971 (+)
CI01000020_06769551_06772924 NA coding downstream 755874 6769310 ~ 6774074 (+)
G114153 NA non-coding upstream 25004 5987391 ~ 5987951 (+)
G114168 NA non-coding upstream 37243 5934512 ~ 5975712 (+)
G114127 NA non-coding upstream 117038 5895627 ~ 5895917 (+)
G114117 NA non-coding upstream 165174 5847553 ~ 5847781 (+)
G114085 NA non-coding upstream 229212 5783516 ~ 5783743 (+)
G114200 NA non-coding downstream 56668 6070104 ~ 6070316 (+)
G114216 NA non-coding downstream 83208 6096644 ~ 6096879 (+)
G114217 NA non-coding downstream 84055 6097491 ~ 6097716 (+)
G114161 NA non-coding downstream 121094 6134530 ~ 6135279 (+)
G114230 NA non-coding downstream 125215 6138651 ~ 6142560 (+)
G114094 NA other upstream 207237 5803052 ~ 5805718 (+)
G113929 NA other upstream 387723 5622707 ~ 5625232 (+)
CI01000020_05267250_05267668 MRPS33 other upstream 744282 5267250 ~ 5268673 (+)
CI01000020_04807118_04808453 NA other upstream 1189169 4806765 ~ 4809414 (+)
G114382 NA other downstream 578788 6592224 ~ 6593564 (+)
G114389 NA other downstream 584910 6598346 ~ 6600180 (+)
G114388 NA other downstream 610831 6617328 ~ 6644816 (+)
G114413 NA other downstream 790112 6803548 ~ 6808718 (+)

Expression


Co-expression Network