G114217


Basic Information

Item Value
gene id G114217
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000020
NCBI id null
chromosome length 7209782
location 6097491 ~ 6097716 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU129720
GTCAGAATATCCTCCAGAGGCCAAATCATACTCACACAGCGCGGCGGGGCTGTTGGCGGGGCTGTCCTCCAAGCCGTCAATCTCCACTAACACTCCCTCAGTGATCCACAGTGTTGCTGGCTCACGCAACTGGTCAGACTCTGTAAAGAGTTCAGGCTCCGGGGTAATGTCCTCTCCTGTCGTCTCCTCAGGTTCAGGCTCGTGCATTGCAGGAAGTCAGTCTCCA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU129720 True 226 lncRNA 0.56 1 6097491 6097716

Neighbor

gene id symbol gene type direction distance location
CI01000020_06035989_06042016 TMTC2A coding upstream 55471 6035989 ~ 6042020 (+)
CI01000020_06000788_06005009 NA coding upstream 92355 6000727 ~ 6005136 (+)
CI01000020_05988468_05989551 NA coding upstream 107938 5988251 ~ 5989553 (+)
CI01000020_05960777_05981596 NA coding upstream 115193 5960777 ~ 5982298 (+)
CI01000020_05942995_05951650 PRMT8B, PRMT8 coding upstream 145088 5941926 ~ 5952403 (+)
CI01000020_06122192_06132967 PPFIBP1A coding downstream 24476 6122192 ~ 6133643 (+)
CI01000020_06272024_06286697 NA coding downstream 174308 6272024 ~ 6286956 (+)
CI01000020_06652576_06656275 NA coding downstream 554860 6652576 ~ 6656971 (+)
CI01000020_06769551_06772924 NA coding downstream 671594 6769310 ~ 6774074 (+)
CI01000020_06784747_06793255 NA coding downstream 686755 6784471 ~ 6794581 (+)
G114216 NA non-coding upstream 612 6096644 ~ 6096879 (+)
G114200 NA non-coding upstream 27175 6070104 ~ 6070316 (+)
G114151 NA non-coding upstream 84055 6012955 ~ 6013436 (+)
G114153 NA non-coding upstream 109540 5987391 ~ 5987951 (+)
G114168 NA non-coding upstream 121779 5934512 ~ 5975712 (+)
G114161 NA non-coding downstream 36814 6134530 ~ 6135279 (+)
G114230 NA non-coding downstream 40935 6138651 ~ 6142560 (+)
G114238 NA non-coding downstream 66951 6164667 ~ 6166211 (+)
G114242 NA non-coding downstream 73543 6171259 ~ 6181364 (+)
G114256 NA non-coding downstream 111888 6209604 ~ 6211436 (+)
G114094 NA other upstream 291773 5803052 ~ 5805718 (+)
G113929 NA other upstream 472259 5622707 ~ 5625232 (+)
CI01000020_05267250_05267668 MRPS33 other upstream 828818 5267250 ~ 5268673 (+)
CI01000020_04807118_04808453 NA other upstream 1273705 4806765 ~ 4809414 (+)
G114382 NA other downstream 494508 6592224 ~ 6593564 (+)
G114389 NA other downstream 500630 6598346 ~ 6600180 (+)
G114388 NA other downstream 526551 6617328 ~ 6644816 (+)
G114413 NA other downstream 705832 6803548 ~ 6808718 (+)

Expression


Co-expression Network