G114256


Basic Information

Item Value
gene id G114256
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000020
NCBI id null
chromosome length 7209782
location 6209604 ~ 6211436 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU129764
GCAGGTTCTGTGAAACTCTTTGGTGATATTTCATACTTCGAGAGTCCTAACTCTTTGAATTAAAATTTGTGTGCACCATTCATCTTACAGACACTAATTATACTTCAGATTTAGGGTTAGTGGTTTTATTATTCTATACAATTTTGCCATGTGTGCATGTTTTTTCAGTGTGTGAACATTTAAAGGGTTAATTCTTAATTCTGTCATTAAAGGATTTATTCATTTTAAAATGAAAATTACACCAAGCTTTACTCACCTTCATGTCGTTCGAAACCCATAAGACCTTCGTTCTTCTTCGGACCACAAATTAAGATATTTTCGATGAAATCCGAAAGCTATTTACAGCAATTTAATTATCACTTTTCAGGCCCAGAAAGGTACTAAAGACATTAAAATGGTCCATGTGACTGCAGTGGTTCAACCTTGTGGTGCGTTCACACCAGACGCGAATGAAGCGTTAAGCGTGAGTGATTTACATGTTAAGTCAATGCAAAGATGCAAATAGATATCCTGCGGCGCGATTCGCGCGAATGAGGCGGTGCGAATGACGCGGCGCGAATTGAGCATTTCGGGCATTTGACGCGCGTAACGCATGATTTGCGCAAATCGTGCGAGTTGAAAAATCTGAACTTTGGCGAAAATTCGCACCGCGTCAGGAGCTTGCTCTAGAAGTGACGTGATTACGACATAGCAAGAGGAGGCAGAAATCCGAAGCAACAATGGAGGACAAAATCATCGTCGCTGTACGATACATCTTCATACTTTTATAGAAACAGGAATAAAAAGGATCTTGCTTGGAAGAAAGTGAATGAGGAAGTCGGACAATCTGGTAAGTTGTAAAAAATGCTCTTTACTCAATTTGAGCTATATATATACAAATATTGAGACTACAAGCTAGCTAAAGCCAGCAAATTGAGCTTATTCGCCGTATTTTACAACTACTTTCCCGCTGACGAGTTGATGTGTTTATTCAGAGGAAGTGTGCAGAAACGAGACTGGAGCCGCCTGGCAGAAGCCCCTCTTATGACACGAATTCGCGTCTGCTGTGAAGTGAATTTCACGCGCGAATGAAGCGAGTAAACTCAAAATGTTCAAGCGTCCAACTACGCGCGAATAGTCGCGTCGGGTGTGAATGCCCCATTAATGTTATGTAATGTTATATTATTTTTTTCTGGCTCAGTATTGGCCGGCTCCTGAGTCAGCATCACACCATCACACCAATACTACATTCATGGACTATTTTAACAATGTCTTTTCTACCTTTTTTGGCCTGGAAAGAGGTAATTAAATTGCTGTC

Function

NR:

description
PREDICTED: acyl-CoA-binding domain-containing protein 5-B isoform X3

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU129764 True 1297 lncRNA 0.41 2 6209604 6211436

Neighbor

gene id symbol gene type direction distance location
CI01000020_06122192_06132967 PPFIBP1A coding upstream 75961 6122192 ~ 6133643 (+)
CI01000020_06035989_06042016 TMTC2A coding upstream 167584 6035989 ~ 6042020 (+)
CI01000020_06000788_06005009 NA coding upstream 204468 6000727 ~ 6005136 (+)
CI01000020_05988468_05989551 NA coding upstream 220051 5988251 ~ 5989553 (+)
CI01000020_05960777_05981596 NA coding upstream 227306 5960777 ~ 5982298 (+)
CI01000020_06272024_06286697 NA coding downstream 60588 6272024 ~ 6286956 (+)
CI01000020_06652576_06656275 NA coding downstream 441140 6652576 ~ 6656971 (+)
CI01000020_06769551_06772924 NA coding downstream 557874 6769310 ~ 6774074 (+)
CI01000020_06784747_06793255 NA coding downstream 573035 6784471 ~ 6794581 (+)
CI01000020_06795794_06800988 GLT8D2 coding downstream 584358 6795794 ~ 6801095 (+)
G114242 NA non-coding upstream 28240 6171259 ~ 6181364 (+)
G114238 NA non-coding upstream 43393 6164667 ~ 6166211 (+)
G114230 NA non-coding upstream 67044 6138651 ~ 6142560 (+)
G114161 NA non-coding upstream 74325 6134530 ~ 6135279 (+)
G114217 NA non-coding upstream 111888 6097491 ~ 6097716 (+)
G114274 NA non-coding downstream 15438 6226874 ~ 6230133 (+)
G114284 NA non-coding downstream 39631 6251067 ~ 6251391 (+)
G114355 NA non-coding downstream 203572 6415008 ~ 6416595 (+)
G114356 NA non-coding downstream 209216 6420652 ~ 6421018 (+)
G114357 NA non-coding downstream 210277 6421713 ~ 6422152 (+)
G114094 NA other upstream 403886 5803052 ~ 5805718 (+)
G113929 NA other upstream 584372 5622707 ~ 5625232 (+)
CI01000020_05267250_05267668 MRPS33 other upstream 940931 5267250 ~ 5268673 (+)
CI01000020_04807118_04808453 NA other upstream 1385818 4806765 ~ 4809414 (+)
G114382 NA other downstream 380788 6592224 ~ 6593564 (+)
G114389 NA other downstream 386910 6598346 ~ 6600180 (+)
G114388 NA other downstream 412831 6617328 ~ 6644816 (+)
G114413 NA other downstream 592112 6803548 ~ 6808718 (+)

Expression


Co-expression Network