G114478


Basic Information

Item Value
gene id G114478
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000020
NCBI id null
chromosome length 7209782
location 6680473 ~ 6681021 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU130028
GTGAGGAGAGGCATGAATTATTCACGTCGCCTCTATCCTGGCTTGGCAGGAAGAAAGGTAGAATGAGAGAAGAGGAGAGAAAAAGAAAGGGAGGGGGGCGGAAGTGGGAAGCAGGAGAATGGGAGAAGGCAAGGAGAAAGTGGCACCGAAAAACAAGATTGTTGGTTTTTTCACTCTGACAGACGCAAAAGGAGGAGCTGTATGACGTTAAAGTTTGTGGGAGTTCACGCGCTCTCGCCTTGTTGCCTTGGTTACAGCCCCCTGCCCAAGCCCCAATATCTCCTACTGGGATCTTTTTGCTCTTAACATGCATACTAAAAAACTACATACACAACCTTGTTATCTGAGGAGTTATATAATGTAAAAAAAAAAAAAAAAAACCACCAAACCAATCATTCAATGAAAATTAAAACACTATACACTAGAACAAGGAAGAAAAGTAACGAGGTAAGACCACTCAGAGCACCCTAGCAAACACATAGCAACGGGGTAAGACCATTCAGAGCA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU130028 True 507 lncRNA 0.44 2 6680473 6681021

Neighbor

gene id symbol gene type direction distance location
CI01000020_06652576_06656275 NA coding upstream 23502 6652576 ~ 6656971 (+)
CI01000020_06272024_06286697 NA coding upstream 393517 6272024 ~ 6286956 (+)
CI01000020_06122192_06132967 PPFIBP1A coding upstream 546830 6122192 ~ 6133643 (+)
CI01000020_06035989_06042016 TMTC2A coding upstream 638453 6035989 ~ 6042020 (+)
CI01000020_06000788_06005009 NA coding upstream 675337 6000727 ~ 6005136 (+)
CI01000020_06769551_06772924 NA coding downstream 88289 6769310 ~ 6774074 (+)
CI01000020_06784747_06793255 NA coding downstream 103450 6784471 ~ 6794581 (+)
CI01000020_06795794_06800988 GLT8D2 coding downstream 114773 6795794 ~ 6801095 (+)
CI01000020_06809322_06816591 NA coding downstream 128301 6809322 ~ 6816591 (+)
CI01000020_06819838_06824266 PARP12B coding downstream 138817 6819838 ~ 6824669 (+)
G114440 NA non-coding upstream 30909 6648227 ~ 6649564 (+)
G114464 NA non-coding upstream 32897 6647124 ~ 6647576 (+)
G114388 NA non-coding upstream 55968 6617328 ~ 6644816 (+)
G114393 NA non-coding upstream 138806 6541424 ~ 6541667 (+)
G114376 NA non-coding upstream 168934 6511219 ~ 6511539 (+)
G114491 NA non-coding downstream 74851 6755872 ~ 6756133 (+)
G114494 NA non-coding downstream 78580 6759601 ~ 6759834 (+)
G114499 NA non-coding downstream 97758 6778779 ~ 6778981 (+)
G114500 NA non-coding downstream 97978 6778999 ~ 6779514 (+)
G114501 NA non-coding downstream 98697 6779718 ~ 6779923 (+)
G114389 NA other upstream 80293 6598346 ~ 6600180 (+)
G114382 NA other upstream 86909 6592224 ~ 6593564 (+)
CI01000020_05960777_05981596 NA other upstream 699225 5960777 ~ 5982298 (+)
G114094 NA other upstream 874755 5803052 ~ 5805718 (+)
G114413 NA other downstream 122527 6803548 ~ 6808718 (+)

Expression


Co-expression Network