G114500


Basic Information

Item Value
gene id G114500
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000020
NCBI id null
chromosome length 7209782
location 6778999 ~ 6779514 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU130050
CATGAGCACAAAACTCTCAGCTCCACTTAACACTAGGTTCTTTGGGAAGCAAGGTTATCTTTCCCTCACAACCAAAAACACACTTCTTTGGTGACATTGTTGATTGTGTGTTCTAAAAACAAAGTGACAAATCTTTCTCGAGCCAAGGACTTCCGTAAAGCTGAACGAAGCGCATTGATGGGTGTGCTCTTGCTCTTTCGCTCTGGTCGATGTGTGCACGCGCGCTCTTCTGGGAGAAGTGGCCGTACAAGGAATTCCGTCCTTTATTACATAATAAAAGGGCAATACTCGAATAAAACTGTCCGAAGTTTGTGAGCAATCTGAAGAGTATTTTTGGCACAGAAATACTCCATCATACGTCCAGCTCGTTTTTTGAAACTTTGGCCATGTTTAGCATGAGAATCCAACTCTTTAACAGTGTAAATAAGTCAGAATGCATGAAAACCTTTAAAGGGTTAGTTCACCCAAAAATGAAAATAATGTCATTTATTACTCACCCTCCTGCCATTCCACACC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU130050 True 516 lncRNA 0.41 1 6778999 6779514

Neighbor

gene id symbol gene type direction distance location
CI01000020_06769551_06772924 NA coding upstream 5836 6769310 ~ 6774074 (+)
CI01000020_06652576_06656275 NA coding upstream 122028 6652576 ~ 6656971 (+)
CI01000020_06272024_06286697 NA coding upstream 492043 6272024 ~ 6286956 (+)
CI01000020_06122192_06132967 PPFIBP1A coding upstream 645356 6122192 ~ 6133643 (+)
CI01000020_06035989_06042016 TMTC2A coding upstream 736979 6035989 ~ 6042020 (+)
CI01000020_06784747_06793255 NA coding downstream 4957 6784471 ~ 6794581 (+)
CI01000020_06795794_06800988 GLT8D2 coding downstream 16280 6795794 ~ 6801095 (+)
CI01000020_06809322_06816591 NA coding downstream 29808 6809322 ~ 6816591 (+)
CI01000020_06819838_06824266 PARP12B coding downstream 40324 6819838 ~ 6824669 (+)
CI01000020_06833378_06846518 NA coding downstream 53828 6833342 ~ 6846776 (+)
G114499 NA non-coding upstream 18 6778779 ~ 6778981 (+)
G114494 NA non-coding upstream 19165 6759601 ~ 6759834 (+)
G114491 NA non-coding upstream 22866 6755872 ~ 6756133 (+)
G114478 NA non-coding upstream 97978 6680473 ~ 6681021 (+)
G114440 NA non-coding upstream 129435 6648227 ~ 6649564 (+)
G114501 NA non-coding downstream 204 6779718 ~ 6779923 (+)
G114505 NA non-coding downstream 31133 6810647 ~ 6810919 (+)
G114436 NA non-coding downstream 133940 6913454 ~ 6914288 (+)
G114427 NA non-coding downstream 159399 6938913 ~ 6940153 (+)
G114532 NA non-coding downstream 297665 7077179 ~ 7079432 (+)
G114388 NA other upstream 134183 6617328 ~ 6644816 (+)
G114389 NA other upstream 178819 6598346 ~ 6600180 (+)
G114382 NA other upstream 185435 6592224 ~ 6593564 (+)
CI01000020_05960777_05981596 NA other upstream 797751 5960777 ~ 5982298 (+)
G114413 NA other downstream 24034 6803548 ~ 6808718 (+)

Expression


Co-expression Network