G114532


Basic Information

Item Value
gene id G114532
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000020
NCBI id null
chromosome length 7209782
location 7077179 ~ 7079432 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU130092
TTGGGAGAAATTACTGTTGTAGTAATTAAATATTTGCTTAGTTATCACCAAAGCTCACTCTATTTTGCTGTAGATAATTAAACCGTTAAGCTGCCTCAGAAGTCTGTCCGAAATCAGTTCCGTGTGGTTCCTTCATGGACAAATGCTGCCTGAAAAGTCATTGCCTGATAGGGCAGTGAGACAACAAGTCAGATGCCATTGGCTGTTAATGAAGCATTGTGGGAAGGTGCTGTTTTTGCTCTCTTGTAGGAGTGCATGTAATTTGGGTAATATATATATATATATATATATATATATATAAACTATATAACCTATATATACATATATATGTGTGTGTGTGTGAGAGAGATGGTCTGTGAGAGAGATGGTCGATCAAGGTAGAACTATTCACCCATAACTCTGCACCCAGTGCACATCAGGTGTGTGTGTGTACATAGGGCACTGATGCGCAATCCAGCGTCACTCTCATTATCCTCCCTCTGCAACAGTGGCCTGATTGTCATGGTTACGGTCATGGTTAAGGTCACCGATACGCCTGTCTGGGGCGTGGTGTAAATTAGAGGTTGTGGTTTTTATCCGGGGTCACTGTCCTGGGTCCTGACCCTCTGGTGTCCTTTGGCCTTTTCTCACCTGTTTGTGATCGATGGGTCTGGAAGGTTTGATTGATTGCCCCTCAAAAATGCCACAGGAGCAAATTAAGATACTGCTTATCTGCACACGCTCAGTTGACTTCTTGTGAGGTCACAGATGCCGGTTATGTGCAATTGTATGTGTCTCCAAATAATATATGTTGCCCGTCTGCATGCGGTGTGATTTCTAAATCAATTGCACGGCAGCCAATAGTAATTGATGTGGCTTTGAGTACTTGGAGGCCGTCCCACCCACAAGATCCCTCAAATTCAATTTGGAATCAGAGGGCAGAGAAGAGGTGAGCGACTCAATATCTCATTCATTTCAACAACACACAAACACACACGGATGCGCACACATCACAAATACCCCAGAAATAGACCCCCACCACCACTACCCCACATAAAACCTCAGATCTCAAGAGCAGGACTTATTGAAGACCACTTGCCCAAAGTAAATCCCCCCATGCCCTACTCTCCACGCATGCAGGGTAATGACTTGGCTTGAGTTTTAATGTCTACCACTGCCCCTGGGAAGACAGCGTGCAGCTTTTTTAAATTTATTTATTTTTTATCGTAAAGCTCACAAAACAGCCCTGGCATTCATCAGGAATGCTAAATGTTAAATACTCACTGAAAATTTCCATCAACCTCCTGCTCCCTTCACTCCTCCTGCCTGTTAGGGAGTGAGGAGGAGAAGGAGAGAGTGTGATGGAGGAAACGCTCCAATGCTCAGAGTCGCAGTGCCCCCGAACTCTAACCCGTGATAGATTGGGTGCTCCTGCAGCGTGACAGACGAGCGATTGATGGAAGGAATGGCGGATAGATGAAGGGAGAGGCAGAGAGAGAGAGAGAGTGTAAGGGGAAAACAGAAGGGAAAGAAACTTGAAGCGGGTGCTTTCTTTAATTGTTTACAGTAAATGTAAGATGATATTTTACCTTTATTGGCATAACAATGTATATAAATTATATACATTTAAAAATAAATACAAATGAAATGGTGGTTTAAGATCACTGTCAGATATTAAAGTCCCCCTGTGGTGAAAATCAAGTTTTTAATGTTGTTTATATGTTTATGTGGTGTTTTTAATATGCTTTAATGTGCAAATTCATAAGTCAACACCACTGCTGAGTATTTTCTGTTTAAAACTGCAGTGATCTAAAGACATTTTCAAAAACGCGGTTTGAAATCGCTGGTGTTTGTGATGTCACAAACCACCTTTCACGTCAATGTGCTGGCGGGCTTTAGCATATCATTAACTATGATCGCTCTGAAGCAAGGGAGTCTCAAAAGAAGCCAGGCTATCCTGGTATTTTACTTGATATGAAAAATCAAGCAAAAGGCTAATCATATTAATTACTGTTATGCATCCGATGTTGTAAAAAGTGATACCATTGAGCAGCGTTTACCTCAACTTACCTTTAGTGGATCTCTGAGCTGGTGTGAGTGAGTGGAGGCGGGGCTAATTAGCATATTCATAGATACTAAGTGAAGCAAGGGTGTTGAGTTACATTCAAGCTATTTTAAGGCATGAAGAAATATTTTTCACAGGAAAAAAAACGTTTATGTCATTTTGGTGATCAAAGATGGGTTTTAAAGGATAAAATTATTGACTACAGGGGGC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU130092 True 2254 lncRNA 0.42 1 7077179 7079432

Neighbor

gene id symbol gene type direction distance location
CI01000020_07050004_07055580 FAXCA coding upstream 21351 7049394 ~ 7055828 (+)
CI01000020_07043558_07046909 CCNC coding upstream 30270 7043558 ~ 7046909 (+)
CI01000020_07029337_07034375 PGM3 coding upstream 42741 7029337 ~ 7034438 (+)
CI01000020_07014667_07020555 FOXM1 coding upstream 56189 7014667 ~ 7020990 (+)
CI01000020_06992285_07002537 NA coding upstream 74632 6992285 ~ 7002547 (+)
CI01000020_07089227_07093896 NA coding downstream 9795 7081414 ~ 7093978 (+)
CI01000020_07097679_07107859 NA coding downstream 18247 7097679 ~ 7109571 (+)
CI01000020_07116109_07120411 RSPH9 coding downstream 36608 7116040 ~ 7120580 (+)
CI01000020_07160189_07169882 VEGFAB coding downstream 80673 7160105 ~ 7170046 (+)
G114427 NA non-coding upstream 137026 6938913 ~ 6940153 (+)
G114436 NA non-coding upstream 162891 6913454 ~ 6914288 (+)
G114505 NA non-coding upstream 266260 6810647 ~ 6810919 (+)
G114501 NA non-coding upstream 297256 6779718 ~ 6779923 (+)
G114500 NA non-coding upstream 297665 6778999 ~ 6779514 (+)
G114540 NA non-coding downstream 156 7079588 ~ 7080932 (+)
G114541 NA non-coding downstream 10775 7090207 ~ 7090476 (+)
G114529 NA non-coding downstream 95297 7174729 ~ 7175341 (+)
G114413 NA other upstream 268461 6803548 ~ 6808718 (+)
CI01000020_06769551_06772924 NA other upstream 303105 6769310 ~ 6774074 (+)
G114388 NA other upstream 432363 6617328 ~ 6644816 (+)
G114389 NA other upstream 476999 6598346 ~ 6600180 (+)
G114382 NA other upstream 483615 6592224 ~ 6593564 (+)

Expression


Co-expression Network