CI01000021_01910328_01917171


Basic Information

Item Value
gene id CI01000021_01910328_01917171
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000021
NCBI id null
chromosome length 7014339
location 1909361 ~ 1917747 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000021_01910328_01917171.mRNA
AGGAAAATAGAGACTGTCACAGAGAGGTGAGACAGATTCTTATGAAATATCTGACCTGCTTGTTTAACATGAGTTTACAGCTTCATACACACAAGAGTCATCAGTACAGGAGCTGTAAATCTCTGTGATTCACAGACTGTGCCTGATGGCAGTAGACAGACTCATTCAGACCCACCTGTTCCTGTTAAGTCTGTTATCGGGAAACGTTGACTTCTACAGCAAACTTACAGTCATTGTGTGTTTAGTAAAAAAGGAAATATCCTTGTCATTTTCTCCACATTTAATGATGAGCTAATACAGACTGTTTCTCCAGCTCTTCAGCATGCAAATGTTATAGCTTTCCTTTTTTCGTTTGACAACTTAAGCCATCATATTATCAGTAAACACTTCACCTGTCCAAATAGGGCATGTCAAAATGTTTAAGTTTTTGAACTTTGCATAGAGTTCAGTCGTTGTTTCAAGTTATTTTAGCTGCTAAATCGAAGAAGGAATGCTAGATTTTCATCTTCAACATTTTTTTTTTTTTCCCATATAAAACTGTTTATTCCTCGTCCCCTCTGGGTGTTTGTGTGAGTAATGGCTGTGAAGAGCCCTGAAGCCTCTCTGTGTCTGCTCTTACTGTCCCTCAGGCTTCAGTTCAGCCCAGTCAAACCTCAGTCACCTGTTCGCTGTAAATCTGTTTCAGACCCGCATAACCACGTAAGGTTGTTCAGCCAAAGAATGAGTCACATTCCAAGTAGAAACAAGGGATGGAAATGCTGTGAGAGTGTTCTTCTGTTTAATAAAACAGATAGCACCTCACACTGTTGTGTAATTCATAAAGGCCTTCCCATCAGCACTTACGCCAAGTACTGCTACCGTAAGCTGCAAAAAGTGGCCATTACTGGGGGCAAGAAGGGTCTGAGGAAGCCCACTCTGGAGGAGATCGATCATGGCCGGAATGCCATCGTGACACCATCTCTTTTCGGGAGCGCTCTGGAGGAGATCATGGAGAGGCAGAGTGAGCTCTTCCCCAACAGGAAACTGCCCTGGGTGCAGGTGCAACTCTCTCAGTATGTGCTGGCCCTGGGTGGAGCCCAGACAGAGGGCATCTTCAGAGTTCCAGGGGATATTGATGAGGTGAACGCTCTCAAGCTGCAGGTGGAGCAGTGGAGAATTCCTGAAAGCCTCTCTGATCCCAATGTCCCAGCGTCTCTGTTGAAGTTGTGGTACAGGGAGCTGGAGGAGCCGGTGATTCCTCAGAGCTTCTATACGCAGTGCATCAGTCACTATGAAGATCCTGATGCAGCCATCAGTGTGGTTCAGTCCCTCCCAGAGCTCAACAGACTCGTGCTCTGCTACTTCATCAACTTCTTACAGGTCTTTGCTCAGCCGGTGAACGTGAGTAGGACTAAGATGGATGTGAATAATTTGGCGATGGTCATGGCTCCAAACTGCCTGCGCTGTCAGTCTGACGATCCCCGAATCATCTTTGAAAACACGCGGAAAGAGATGTCCTTCCTCCGCATACTCATAGTCCATTTGGACACCAGCTTCATCAAGGGCTTAATCTGACAGTCACGTTTTATTCATTATTTTGTGGCATAGCTCAGAATTGAGTCATTTGAGTGAATCATCCAGGAGATGATTGGTATCAGGACATTCTTCTGCTCAGAGATCTTTCTCATCGTCAAACATCACAATATTATTTCGGACAATGCCTAAAATTCCAGCTTTGGCTCAATGTGAATCATCCTGAACTTGACTCTTATGACTCTTCTGGAAGCCAGACTCTATTTGAACTGAATCAGTTGACTGAATTTGATTCCACATCACAAAGATCACACACAGGGTTGTTGTCACACATTGAAACAAAACCAATGCATGACCTTTGTCTTCTCTTGGTCTTTTATATTGATTAGCAGGGAAATGCATCCTTTGGACAATCTTAATCGTAATAACACACATGCAATATGATCTGCAGTGTATTTTCTTAATTTAATATGGTATGAGTGTTCTGATTATTTAATATCAAAGGTTTGTAAGCTCAAGTATGAGTGCAGGGAGAATTACTGGCTTCAGAAAGAAGAGTTGAATATCGCAGAGCTGTGGACCACAAGGACAGCTCTGAAATACTTTGCAAAGCTTGAGGTCTGGTGCCTTAAATGGAGAGTGTTCGCTGACGTATAAGATGCATAAGTGCCCATGTACATAAACACACTCTCCATGCTTCAAATGAACGGGTTACTCGAGCAATTTTCAATCTGTCCCTCTGTAGTTTTCCCAGTTGTCCCATATGGAAATAGAAAATTAAGTTTCCAGATGTGTGTTTTCTACATCAGTGATGATTAAGCACAACGAAACAGTAGCAAACTGAACCAGGAACCAGATCGGAAGATCTGCTACAGGTCTCACAACTCTCACAGAAATAGCTGCTGCTCATTGGCCCTCTGAAAGTCGACTAGGTTTCAGTTGTCCCAGCAGCTCCAACATCAACAGATGGACAAGAATTTTGTGTTCAGATTTGCCCAGGTTGAATAAA

Function

NR:

description
Uncharacterized protein

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000021_01910328_01917171.mRNA True 2521 mRNA 0.43 6 1909361 1917747

Neighbor

gene id symbol gene type direction distance location
CI01000021_01805603_01824428 NDRG3, NDRG3B coding downstream 84933 1805370 ~ 1824428 (-)
CI01000021_01791577_01796792 SLA2 coding downstream 112569 1791397 ~ 1796792 (-)
CI01000021_01735408_01735712 NA coding downstream 173649 1735263 ~ 1735712 (-)
CI01000021_01626896_01630224 LIME1 coding downstream 279137 1626862 ~ 1630224 (-)
CI01000021_01610076_01611493 NA coding downstream 297601 1610025 ~ 1611760 (-)
CI01000021_01922936_01956597 NA coding upstream 4972 1922719 ~ 1956597 (-)
CI01000021_02005120_02042997 SULF2B, SULF2 coding upstream 87079 2004826 ~ 2043167 (-)
CI01000021_02045322_02085906 NA coding upstream 127191 2044938 ~ 2086237 (-)
CI01000021_02104468_02137901 NA coding upstream 186351 2104098 ~ 2139909 (-)
CI01000021_02191178_02193192 NA coding upstream 272297 2190044 ~ 2193348 (-)
G116805 NA non-coding downstream 98022 1810846 ~ 1811339 (-)
G116834 NA non-coding downstream 121679 1787299 ~ 1787682 (-)
G116833 NA non-coding downstream 122388 1786218 ~ 1786973 (-)
G116802 NA non-coding downstream 140294 1764802 ~ 1769067 (-)
G116819 NA non-coding downstream 171894 1736952 ~ 1737467 (-)
G116847 NA non-coding upstream 269831 2187578 ~ 2187818 (-)
G116848 NA non-coding upstream 270117 2187864 ~ 2188492 (-)
G116872 NA non-coding upstream 333055 2250802 ~ 2251285 (-)
G116889 NA non-coding upstream 410316 2328063 ~ 2329874 (-)
G116891 NA non-coding upstream 412479 2330226 ~ 2330431 (-)
G116730 NA other downstream 546557 1361878 ~ 1362804 (-)
G116856 NA other upstream 292174 2209921 ~ 2210496 (-)
G116893 NA other upstream 413567 2331314 ~ 2334316 (-)
G116997 NA other upstream 795038 2712785 ~ 2713247 (-)
G117683 NA other upstream 974113 2891860 ~ 2892359 (-)
G117893 NA other upstream 1126272 3044019 ~ 3044787 (-)

Expression


Co-expression Network