CI01000021_01977248_01980449


Basic Information

Item Value
gene id CI01000021_01977248_01980449
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000021
NCBI id null
chromosome length 7014339
location 1976939 ~ 1980506 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000021_01977248_01980449.mRNA
GTATAAAGCAGGAAAGAGGATGACAAAAAACAGAGGAGACTGTGACTAACTTCTAGAGCACTTCTGACACAAAATGTGTTTCCTCTAGATGAGCCCATACTGCTGATGGTGTGGCCTCTTAGAGGATGAGGTACAACACAAGAGTTTGAGGATGAAAGGAGAGAGTGATAGGAAGTGGGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAAAAAAACAGTGAGAGAGAGAAAACAGTGAGAGAGAATCATGAAGAATGAGAAACAAAGAGAGTGAGAAAGCGTCTGGACTGAAGTTCAGGACCAAGTCTAGATCTTGCCAGAATATTCAGTCATTCCTGGCTGCAGAAGTATGGCTGTGCCTTCGGACGTTTTGTTTTGAGTCTAGAAATTTTCTCACACTCATCACTCTTCTGCCTGTATCCATCAAAGAGAAAGCAAACGAAAAAGCACAACAGGTCACAGTAATTCATTCCAGTCATGATTTAATCATGAGGGGACTATGGACAATATTTATAGAACACTTTCTAAAAACAGGTACATGTCCACACAGTCTAATTCACAGGGAAAAAACATATAATGGGATCACCCCAATTTCCAGCAACTACGACCTGCCAAGAACAGGTCAGTCCAGAAAAACACAGGACTCAGCTCCACTAAACGATCTTGCAGGCTCTTCACAGAACTACATGCTGCTTGACTCGCTCTCACGTGTGCCTCTGTTTCAGAAACAGAGATGGGAATTACATATGCATGTCTGGAAAGCATTGGATGGAAAAGGGGGCAAAAGGGGGAAAGAAAGACCAAAGGAAGAAATAATGTAAAATAAGTGAAACAGAGAACATAAAACTGTGTGCCAGTGGATGTGTTATATGTTTGGA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000021_01977248_01980449.mRNA True 933 mRNA 0.43 2 1976939 1980506

Neighbor

gene id symbol gene type direction distance location
CI01000021_01771612_01785627 EXOSC10 coding upstream 191273 1771389 ~ 1785666 (+)
CI01000021_01717640_01718394 NA coding upstream 258060 1717640 ~ 1718879 (+)
CI01000021_01519982_01528860 GSS coding upstream 447834 1519982 ~ 1529105 (+)
CI01000021_01506852_01513139 BIRC7 coding upstream 463633 1506216 ~ 1513306 (+)
CI01000021_01463736_01472529 CACNB3, CACNB3A, CACNB3B coding upstream 504053 1463736 ~ 1472886 (+)
CI01000021_02230472_02252713 NA coding downstream 249485 2229991 ~ 2253146 (+)
CI01000021_02269000_02272309 NA coding downstream 288183 2268689 ~ 2272396 (+)
CI01000021_02322467_02328819 SNX21 coding downstream 341961 2322467 ~ 2329864 (+)
CI01000021_02331361_02334546 NA coding downstream 350644 2331150 ~ 2334622 (+)
CI01000021_02346223_02369457 NA coding downstream 365499 2346005 ~ 2371089 (+)
G116019 NA non-coding upstream 71658 1904978 ~ 1905281 (+)
G115845 NA non-coding upstream 88199 1886549 ~ 1888740 (+)
G115837 NA non-coding upstream 100429 1811946 ~ 1876510 (+)
G115976 NA non-coding upstream 161952 1814698 ~ 1814987 (+)
G115973 NA non-coding upstream 165576 1810883 ~ 1811363 (+)
G115844 NA non-coding downstream 30524 2011030 ~ 2013047 (+)
G116163 NA non-coding downstream 195275 2175781 ~ 2175985 (+)
G116167 NA non-coding downstream 198654 2179160 ~ 2179552 (+)
G116185 NA non-coding downstream 229958 2210464 ~ 2210703 (+)
G116216 NA non-coding downstream 267760 2248266 ~ 2248530 (+)
CI01000021_01332646_01333910 NA other upstream 642530 1331665 ~ 1333951 (+)
G115519 NA other upstream 1492975 480530 ~ 483964 (+)
G116236 NA other downstream 309311 2289817 ~ 2297195 (+)
G117237 NA other downstream 1257348 3237854 ~ 3243364 (+)
G117202 NA other downstream 1288638 3269144 ~ 3328233 (+)
G117484 NA other downstream 1975640 3956146 ~ 3957752 (+)
G117493 NA other downstream 2052494 4033000 ~ 4035676 (+)

Expression


Co-expression Network