CI01000021_02230472_02252713


Basic Information

Item Value
gene id CI01000021_02230472_02252713
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000021
NCBI id null
chromosome length 7014339
location 2229991 ~ 2253146 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000021_02230472_02252713.mRNA
CTATTTAATACCGCCCTGTTTCTGGACTCTTTGCCAGTTTATTGTTGGATGTGTTATGCTCATGGAACTATTGCTGTTTTTCTGCAGTTCAAGAAGTCTGTCAGTTAAGTTGTGTCTAGTCTGTCTTGTCAAGTGTGTCTCACCTGTTTTCCTGTTTAGTACCCTGCTGCCTGCATGTACCTGTCGGGACGCTGACCGAGGTGCTGTGTGTCTCTGCCAGGGCTGTCCACTCGTTACTACCTGTCTGCTGCGAGTTCAACTACGCTATGTGGGACAAGAGACTTTTTCCTGTGTTACCAAGACTTTTCCTGAGTTACTACCAGTTCTGCATCCTGCTTCATCCTTTCTGCCTTTGGATGGCAGACTGCCTGAGTTATTTAATGAACTGAATAAAGCTTTTCTGTGTCCTGTACCTTTGTGTTTGGGTCCTCTGTCCACTCCCTGACAGAATAAGCTGGCCAAGATGGACCCAGCAAGGGAGATGCCAATTCGCTCTGCGGTCGAGATGCAGGGAGCTATGCTGGGCAAGCATGAGGAGGAGCTTTCCGTCGCCAGACAGGCTGTGGAGAGTCTGGCAGCCCAGGTCACTGATCTCACGAGCCAGCTGCATCATCTCCGGCAGGACCAAGCTATTTCGTCCGTACCTCATAACTCCTCTGAGCCCAGGATTAATAATCCCCCTTGTTATTCGGTTGAGCCCTCGGGATGTCAGGCTATTTTGACCCAATGCGAACTTGTTTTGTTTCTTCAGCCGACCACCTATGCCGAAGAACGCTCCAGGGTTTCCTTTGTGGTTTCTCTTCTCACTGGACGAGCACACAATAAAAGCGAGGGCTCGTCAGTAGTCAGGGGAGTACTGGCGAGCGCGACATCTATCTCCCCCCTGCTCAAGACCCGCACCATATACAAGGCTGTTGTGCGCTGGCAAGGTTCATCGTTCACCTGTTCTGTCCTTATTGACTCTGAAGGGAACTTTATGGATGAGAGGGAATTCTGCCGGCAGGTTGGTGCGACTGTCAGCCTGTTGTCAGGATTTCATCCTCAGACAAATGGCCAGGCCGAACGGGCCAACCAGATTCTCAGGCGCTTACTTTGCTGTCTGGCAGACCGCAATCCCTCGTCATGGAGTGAACAATTGTCATGGGCCGAATATGCACAATACTCTCTACCCTCGACGGCTACTGGTTTGTCTTCATTCTTTTGTTGTTTAGGCTATCAGCCTCCCCTATTCTCCTCTCAGGAGCCTGATGCTGCCGTTCCCTCGGTGCAGGCGTTTATTCTGCGTTGTCGGCATACCTGGAAGAGGGTGCAGATCAGGATACGGGAGCTGGTGAGCAGGCTGACAGATGATGAAGGGCAGAAGACAGATGACGGATGACAGAAGTCGGGATACACAGGAATCGCAGGTAAGGTACTCAGGTGAGTAGGCAGGTAAGGAGTCTGTACGTGTTTGTATCAAGGACGAGACCAGACAATGATGTGCAGGGAATGACGGGAGATATAGGGTGTGTTGATAAGGACATTGAGGACGATTGAGAATGATTGGACGGAATGTGGTGAACTGGTGTTGATGGGTTGAATGATGGTGTTGTTGATTCCATGACACCTAGTGCCTTGAATTAAATTTATTGATTATATTTAATAATTGACATAAAACACATTAGACATTGTTAAATAATTAGCTTCATACATTAGCAGATTTTGAAATGGGAGGGAAATTGAAAAAAAAATCTGCCATGTTTTAAACTTACTTTCATATAGATCTTTCTAATAGGCAGCTAGTTCATTAATATTCTGTGGATGAAATCCCA

Function

NR:

description
pol polyprotein, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000021_02230472_02252713.mRNA True 1811 mRNA 0.48 4 2229991 2253146

Neighbor

gene id symbol gene type direction distance location
CI01000021_01977248_01980449 NA coding upstream 249485 1976939 ~ 1980506 (+)
CI01000021_01771612_01785627 EXOSC10 coding upstream 444325 1771389 ~ 1785666 (+)
CI01000021_01717640_01718394 NA coding upstream 511112 1717640 ~ 1718879 (+)
CI01000021_01519982_01528860 GSS coding upstream 700886 1519982 ~ 1529105 (+)
CI01000021_01506852_01513139 BIRC7 coding upstream 716685 1506216 ~ 1513306 (+)
CI01000021_02269000_02272309 NA coding downstream 15543 2268689 ~ 2272396 (+)
CI01000021_02322467_02328819 SNX21 coding downstream 69321 2322467 ~ 2329864 (+)
CI01000021_02331361_02334546 NA coding downstream 78004 2331150 ~ 2334622 (+)
CI01000021_02346223_02369457 NA coding downstream 92859 2346005 ~ 2371089 (+)
CI01000021_02378299_02383589 NA coding downstream 124898 2378044 ~ 2383760 (+)
G116185 NA non-coding upstream 19288 2210464 ~ 2210703 (+)
G116167 NA non-coding upstream 50439 2179160 ~ 2179552 (+)
G116163 NA non-coding upstream 54006 2175781 ~ 2175985 (+)
G115844 NA non-coding upstream 216944 2011030 ~ 2013047 (+)
G115835 NA non-coding upstream 228527 1958169 ~ 2001464 (+)
G116231 NA non-coding downstream 32230 2285376 ~ 2285643 (+)
G116245 NA non-coding downstream 44189 2297335 ~ 2297567 (+)
G116246 NA non-coding downstream 53254 2306400 ~ 2306639 (+)
G116253 NA non-coding downstream 98375 2351521 ~ 2351780 (+)
G116243 NA non-coding downstream 152111 2405257 ~ 2408394 (+)
CI01000021_01332646_01333910 NA other upstream 895582 1331665 ~ 1333951 (+)
G115519 NA other upstream 1746027 480530 ~ 483964 (+)
G116236 NA other downstream 36671 2289817 ~ 2297195 (+)
G117237 NA other downstream 984708 3237854 ~ 3243364 (+)
G117202 NA other downstream 1015998 3269144 ~ 3328233 (+)
G117484 NA other downstream 1703000 3956146 ~ 3957752 (+)
G117493 NA other downstream 1779854 4033000 ~ 4035676 (+)

Expression


Co-expression Network