CI01000021_03119361_03125084 (EIF4E3)


Basic Information

Item Value
gene id CI01000021_03119361_03125084
gene name EIF4E3
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000021
NCBI id null
chromosome length 7014339
location 3119361 ~ 3126781 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000021_03119361_03125084.mRNA
ATGGCGGTTCCTGCAGCCCCAAACCTGCAGCTGAACACGGCGAGACAAAGCAGCCCAGTGAACTCTACAGAAAACAACATCCACATCGACGAGCGAGAGCTGGAAAACATCACCAACAACGTCGAGGACGGCACCTCTCTGCCTCTTCACTCTCCCTGGACCTTCTGGCTGGATCGGTCATTACCAGGTACAACGGCAGCGGAGTGTGAATCAAATTTGAAAAAGATATATACCGTCCACACTGTACAGAGTTTCTGGAGTGTGTACAACAACATTCCTTCTGTGTCCTGCCTTCCTCTGAGGTGTAGCTATCACTTAATGCGAGGAGAAAGAAGACCACTATGGGAAGAGGAAAGCAATGCAAAGGGAGGTGTTTGGAAAATGAAAGTGCCAAAGGAGAGCACAACAGCTGTTTGGAAAGAGCTGCTGTTGGCTACGATTGGTGAACAATTCACAGATTATTGTGCATCAGAGGATGAAGTTGTAGGAGTAAGTGTCAGTGTGAGAGAACGAGAAGATGTGGTTCAGGTCTGGAATGGAAACGCCTCCTTTGCCAATGAGGCAAACGTTTTAGGAAGAATCTACGAACTTCTTCCACAGATATCTTTTAAAGCAGTATTTTATAAACCACACGAGGAGCACCATGCATTTGAAGGTGGTCGCTCAAGACATTAGCGAGCTTTGCACATTCATCACATTTTTCCCTCTTTTTGGACTGATCCTAGAGAATGGACTGAAAACGGAAAACAGAATCCCTCCTGGGCGAACAGAACTCTTGGTTTTTGCAGTTCTTTCATATCATAGGGAATGTTACAGCCCTGTTTTTAAGTTGTAAGCGTTGCAGATGATCCCTCCATGCTTTTCATGAGGAGTTTTCTCATACCAGATATTTAGGCGATATCAATTAAGATCACATAGCAGTAGCATATGTAATATAAATCATCACAACAGAGCAATGTTGCCAATTGTTATCGTTTCCCCACTATTTCTAGGTTTACTGATCAAATGTGCAGTCCAGTGCTCGTCAGAATATATACTCGATGTGTTAGAAATTTTATTTGCAGAGTTAGAGCGTCCATTAGGATCAAACTCTTAGGGCTGTTTTTCTTAGACGCACATTAGGCAGAACCTTAAACTTAAAAAAAGTCCAAGGCTAAGCCTAATGTGTTTCTGGGAAACTATCTTTTATGCAAAAGTATTGCACATTTCTCTTCTGGCTTGGAGGTTAATGAATTCAGAGCAAATGTAAGTGGGTGTAACACAATCTTGGTTATAACAGTAAATATACAGCAAAATGCATATGCAATTCCTCGTTTTCACCCCAAACTGAATATTTAAGTACATTTAAATAATCCTGAATTAATCACATGAGGGTAAAATCTTGCAAACAGCTTTGCTTTTATGATTTAGAAAACTGTATCCAGACCTCCTCTTGTAGTATTTTATGTATATGAAAACTGTTTTAGAAAAGCGTCAGAGCACTGTTGAACTTCTCCTTTTTTTGGGGTTACTGCATTGTGGTTGATATGTTAATAACTTTAGCCCTTTACCCCATAAGTGTCTTGTCTTCATCAGAATAGTCCAAATGCTTAATATAAGTTGTTTTTTTCTTTTTACTTATGCATTTGCTCCTAACTGCCTTTTTGTTCAGTATAATCACACTGTGTCTTGTTTCAGAGTGCTTATTATTGTAGTTTGTTTTGTTGTGTTTGGATGGATGGATGGATTCGAGAGGGGCTAGTGTAGGTATTGTGAAATGATGTAACTGAAAATGACCTGTGTAATCATCAGAGCATATATTTTTTAGTTTTTCAGTACCAAAGATATTTCCTTTCTGTTCTCCTATGTTATAATTTATCATGTCCTGCGTCCTTCTGCACTCGCATAGAGGGAGTTACAACCGCGTTTCCTATGTTTGTCTTTACCAGTGTTTGTCATGATGCTGTGTGCCGATTTTATTTAGGTTTGTCAAGTCGAAAGCCCAAAAAGACCTGCATCATGAACCAGGTCTCTTAATGCACTAAAAAGCACAATTATGAGTTTGTCCTTCATATGGACAAGGATGTGCAAAATAATCTGTACATGCAGCTGACCTTTCATATTTCAGCCTTTTCCTACCACTGATCTCTAAATGAGAAATGCGAGTACTGAGGTGGATTTTTGGAATTTTTTTTTTTTTTTTTGGAGCATTTGTGTCGGTTTTCCAGGCTCCCAATCAGGATATGAAACCTCGAACTGATTGTCAATCTTCTGGAATGGTGCCTTGTGTTCTCCCAGGGTTTCACTCATAGAATGTTTTGTTTATCTCTGTATTTAATCAGTTATTAGTTTTTTTCTTTCTTTTCTTTTGCTTATAGGTTTTGAAATATTGA

Function

symbol description
eif4e3 Predicted to enable RNA 7-methylguanosine cap binding activity and translation initiation factor activity. Predicted to act upstream of or within regulation of translation and translational initiation. Predicted to be part of eukaryotic translation initiation factor 4F complex and mRNA cap binding activity complex. Orthologous to human EIF4E3 (eukaryotic translation initiation factor 4E family member 3).

GO:

id name namespace
GO:0005737 cytoplasm cellular_component

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000021_03119361_03125084.mRNA True 2372 mRNA 0.39 7 3119361 3126781

Neighbor

gene id symbol gene type direction distance location
CI01000021_03101146_03115161 RYBPA coding upstream 3893 3100953 ~ 3115468 (+)
CI01000021_03044076_03086657 NA coding upstream 32704 3044076 ~ 3086657 (+)
CI01000021_02930718_02985342 CNTN3A.2 coding upstream 134019 2930718 ~ 2985342 (+)
CI01000021_02877008_02877864 NA coding upstream 240538 2876517 ~ 2878823 (+)
CI01000021_02581650_02610697 NA coding upstream 507754 2581650 ~ 2611607 (+)
CI01000021_03164405_03179692 FOXP1A coding downstream 37624 3164405 ~ 3179949 (+)
CI01000021_03349081_03350266 NA coding downstream 222300 3349081 ~ 3351180 (+)
CI01000021_03382666_03386768 S1, KRT8, E3, KRT4 coding downstream 253988 3380769 ~ 3386900 (+)
CI01000021_03428718_03432817 NA coding downstream 301795 3428576 ~ 3433102 (+)
CI01000021_03510302_03551418 PLXNB1A coding downstream 383467 3510248 ~ 3551572 (+)
G117182 NA non-coding upstream 95128 3024032 ~ 3024233 (+)
G117164 NA non-coding upstream 226832 2892107 ~ 2892529 (+)
G117161 NA non-coding upstream 229500 2889239 ~ 2889861 (+)
G117138 NA non-coding upstream 249034 2869955 ~ 2870327 (+)
G117137 NA non-coding upstream 251233 2867811 ~ 2868128 (+)
G117239 NA non-coding downstream 112554 3239335 ~ 3299281 (+)
G117202 NA non-coding downstream 142363 3269144 ~ 3328233 (+)
G117260 NA non-coding downstream 166485 3293266 ~ 3293887 (+)
G117211 NA non-coding downstream 193816 3320597 ~ 3323372 (+)
G117303 NA non-coding downstream 241533 3368314 ~ 3368525 (+)
G116236 NA other upstream 822166 2289817 ~ 2297195 (+)
CI01000021_01332646_01333910 NA other upstream 1784952 1331665 ~ 1333951 (+)
G115519 NA other upstream 2635397 480530 ~ 483964 (+)
G117237 NA other downstream 111073 3237854 ~ 3243364 (+)
G117484 NA other downstream 829365 3956146 ~ 3957752 (+)
G117493 NA other downstream 906219 4033000 ~ 4035676 (+)
CI01000021_04886787_04893309 PLAGL2 other downstream 1715952 4886337 ~ 4893474 (+)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location