CI01000021_03319954_03323293


Basic Information

Item Value
gene id CI01000021_03319954_03323293
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000021
NCBI id null
chromosome length 7014339
location 3319110 ~ 3323340 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000021_03319954_03323293.mRNA
ATCTGATCTCCTTTTCATTAAGATCTCTCTGCAGAAAATTGTGCAAAATGCAAAACTTCAGCGTTCAGAACAAAAGAATATACAGAATGCCGTCAGAGGATCTCAGCATGCTGAGACCCACATTTTACTCTTGGAGAAATGCTGGGAACAGGGGTTCCTATTCCAAGGAGATCTTCGGATCTACCACTGCACAAATGGGGCTAGTTGGAAATGTTGCAAATGAAAAGGAAACCATGCAAATCTTGAATGAACGTCTTGCTTCCTACCTGGAGAAAGTTAGGAGTTTGGAGAAGGCCAACGCCGAACTGGAGGTGAAAATCCGCCAGGTTATGGAGAAAAAAGGTCCAGACGCTAAGGACTACAGTCACTACCAAGCCACCCTTGATAAACTACGCAAAGAGATCCTGGAGATGGTTTTAAGCAATGCAAATACGAGCATTCATATTGACAATGCCAAGTTGGCTGCTGAAGACTACAGGGTCAAGTTTGAAAATGAATTTCAGCTAAGACAGTCTGTTGAAACAGACATTAATGCACTGAGAAAGATGCTGGATGACATCAATGTGGCACGGCTCCATCTGGAAAATGATGTTGAAGGTTTGAAAGTGGAGCTCATCAGTTTAAAGAAACAACATCAGCTGGAAGTGTCAGAAATATATAGTCAGATCACCCAGTCAGGAGTGCAGGTGGATGTTGATGCTCCTAAGGGACATGATCTGATTAAGATCATGGAGGAGATGAGAGCGAAGTATGAAAAGATCGCCCTCAAGAACCAGGAGGAGCTCAAAGCCTGGCACGAATCAAAAGTTCAAGTGACCGAGAACACTGCAGCATTGAAGGAAGCCAGAACACAAGTCAGTGTGAGCCGCAGGCAGATGCAAACTTTGGAAACAGAGCTGCAGTCTCTGACCGGAAATAGAGCATCTTTGGAAGAAACCCTTCATGAAACAAAGTTGCGATATGGCATGCAGTTGGAGCAATACAATGGCATAATTTTGCTGCGGGAGTCTGAGCTTAAGCAGCTGCGTGATGACATTCAAAGTCAAACGCTGGAGTATCAGGCCCTGCTCAACATTAAGATGGAGCTGGAAGCTGAGATAGCCACCTACAGGAAACTTCTGGATGGAGAAGATAAATACTGGAGGAGCCTATTCACAGGAAAAGATGGTTGGTTTGCAGACGACGATGTCAACGCAGACATTTGTGGATGGAAAAGTGGAGCTGGTGATCTGCGCAGGCCAAAATGATCCAGATGAAATTTTTTGAGTTATAAAAACACTTTCTTCCAATATGCATAGATATAAAAATCCAAAAAATTTGATCTTAATTTAAATGGACACACTCTAATATAAATCTAGGTCTTTTCACACTTGAAATCATTAACCCTGGGTAAACGAAATTGTTATCTTGCTTCACATTTCACATTGCTCACAACTTACCTGGGGTTAACAATTAATCCCGGGTATTCATAAATTGAAGTTTTACACTGTACATTCCTAATCCCTGGGTTAATGTCCTTTTGGATATGTGCAGTGTCAGTGTTACTGATTGGACGAACTCTCTAGCTCTAGCATTGAGCATCCTTATATTATATACTGCCAACCATATTAAAAAAATTTATCCTGAAAGGACTTTTCGAACTATAAAGGTAAGAATGAAACAATCTCTACTTTACTCCAATTTCACGCTTTTTTCATGTCATGTTTTCTGTCACCATTTGACATTTTCCCCCTCAAACGCTGAAATCATTTTATACAACACATGGTGTTTCCGTGACTGTGAATATGCGGCAAGCTATTGGTTGTCAGTTGCTAAGCATCTAGTCATAACATTCTAACACCGCATCATTTCACATTGTACACGTTTGACACCACAATGTGGGGGAAACACCAAAAAAACAATGCTAACCCTGTTCCGGAGCAGGGTTTCATAACCATGGGTAAAAAGCGTTGCTAACCACACTTTTTAATTACAAGTGTGAAACCTTCCTTTACCCGGGGTTAAAAAAGTAGGGTTTAGAACAGTGACAACCTGTTGTGAAAAGCTGTTTTTTGTACTTATGCCCTTCTTTTGAAAGTCTTATTGAATAAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000021_03319954_03323293.mRNA True 2091 mRNA 0.41 7 3319110 3323340

Neighbor

gene id symbol gene type direction distance location
CI01000021_03267771_03288743 EIF4BA, EIF4B coding downstream 30367 3267302 ~ 3288743 (-)
CI01000021_03246184_03250332 NA coding downstream 68778 3246011 ~ 3250332 (-)
CI01000021_03184886_03225117 TNS2, TNS2A coding downstream 91747 3184566 ~ 3231042 (-)
CI01000021_03088285_03098959 NA coding downstream 220151 3088025 ~ 3098959 (-)
CI01000021_02791299_02829637 CHL1A coding downstream 489231 2790485 ~ 2829879 (-)
CI01000021_03324720_03328120 KRT18 coding upstream 1015 3324355 ~ 3329454 (-)
CI01000021_03438153_03448377 NA coding upstream 113420 3436760 ~ 3448377 (-)
CI01000021_03572797_03577241 SLC16A7 coding upstream 249429 3572769 ~ 3577582 (-)
CI01000021_03748559_03755297 ADRM1.S, ADRM1 coding upstream 425013 3748353 ~ 3755297 (-)
CI01000021_03760052_03774483 OSBPL2, OSBPL2B coding upstream 436376 3759716 ~ 3774483 (-)
G117789 NA non-coding downstream 183282 3128169 ~ 3135828 (-)
G117749 NA non-coding downstream 200602 3109921 ~ 3118508 (-)
G117777 NA non-coding downstream 209251 3109342 ~ 3109859 (-)
G117915 NA non-coding downstream 238613 3080216 ~ 3080497 (-)
G117957 NA non-coding upstream 13929 3337269 ~ 3337605 (-)
G117966 NA non-coding upstream 26375 3349715 ~ 3350490 (-)
G117974 NA non-coding upstream 40708 3364048 ~ 3364254 (-)
G117984 NA non-coding upstream 51284 3374624 ~ 3374944 (-)
G117985 NA non-coding upstream 51693 3375033 ~ 3375354 (-)
G117893 NA other downstream 274323 3044019 ~ 3044787 (-)
G117683 NA other downstream 426775 2891860 ~ 2892359 (-)
G116997 NA other downstream 605863 2712785 ~ 2713247 (-)
G116893 NA other downstream 984794 2331314 ~ 2334316 (-)
G116856 NA other downstream 1108614 2209921 ~ 2210496 (-)
CI01000021_03902018_03931315 ACSS2 other upstream 514082 3901897 ~ 3932508 (-)
CI01000021_04035411_04049515 CCM2L other upstream 721944 4035189 ~ 4049592 (-)
G118639 NA other upstream 1426757 4750097 ~ 4767372 (-)
G118801 NA other upstream 1830551 5153891 ~ 5154291 (-)
G119215 NA other upstream 2201515 5524855 ~ 5530926 (-)

Expression


Co-expression Network