CI01000021_03349081_03350266


Basic Information

Item Value
gene id CI01000021_03349081_03350266
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000021
NCBI id null
chromosome length 7014339
location 3349081 ~ 3351180 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000021_03349081_03350266.mRNA
ATGGATCTACAAATATCAGTTTTTCTTCTGTTCATTCTTTTTACTGCAGGTGGCATTGCTTCTAAGGTGAATGTTAAAGATTGTGCTTCTTTCTGTCAAAGTGCATCTATGAACATAAACATTCTAAAGATGACTTCTTCCTGCTGTAACACAAACCAGTGTAACGTCCAAGATGATCCAGGGACTTTTGGAGACCATCCAGTGGTTGTAAAAGGCTGTGTCTCTAAATCTATTTGTGATGCCACGTCATCGGTTCCTAATATTGAGAGCATCTCATGTTGTGAGGGGAACCTGTGTAATGATGCTCAGAGTGTCACTCAGAGCTTCCTGTTCCTCTGCTGTTCTCTGCTCTTCTACTTCCTGCTGCACTGAATCCAGCAGCTCTGCAAATCCTACTGTAAACCCGAATAAGTTGGGCTAACTCAAAAAATTTGAGGTAATCAGTTACATCAAATTTTGAGTAATGATGTTCCCAATTTTAAGAAAGCAGAACTATCAAGTTTTGAGTTTGTAGTACTCACACATGATAATTGCTCTTAACTTGAAGTACTGAGTTAGATAACATACACTTTGAAAGCAATTAACACAAAATATTTAGTTAATTAATTTTTTATTGAGTTCTTTCAAATCAAATGACTTATTTACTTCAATGTAAACCTTAATAAGAAAATTCAGAAAATGCCAACTTGCTAATTTGCTAACATGTTAACAATAGCATGGTATAACACTTACTGAATGAGTACAGCAACTTAAAACATGTAACTTACCTGCTCTCATACCAAGCCACATGCGCTACTTGTCACCATGATGGTAACTCTCCAAAAACCCACATTAACAGAAACTCTTCTAAATTAGCATAACAAAACATTAATCACTACTAAATCTCCCTTATATAGTGTTTTTTGTGCAAAATTAATGGATAACACTTAATTTTAGCATTTACTCTCCCTTTCGAGTGCCATGGGCAAAGCATGCTGGGAAATAGAAATCCCAGCCCAGTTTCAATTAAACTTAAGTTAGTCTAAATTAAAAGAAATGAGTTCATACAACTCAAAACAATAAAACAGTTCAGTTTACTTAAAATATATCAGTTCTGTGAACTCAAAAGAAAAAGAAAGTTCTAAATACTCATAACAGTTAATTTAACTGAACTAGTTTGTTAAATTTAAGTTTGTCCTACTCAAAACAATTAAGTATTTTGAGCATTAGGGTTTACAGTGAATGAGACACACTGCTAAATATATAGCTTGTATTTGCTATGAAATTCTGATGTGACATTTTATGAA

Function

NR:

description
hypothetical protein cypCar_00041098

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000021_03349081_03350266.mRNA True 1286 mRNA 0.34 3 3349081 3351180

Neighbor

gene id symbol gene type direction distance location
CI01000021_03164405_03179692 FOXP1A coding upstream 169132 3164405 ~ 3179949 (+)
CI01000021_03119361_03125084 EIF4E3 coding upstream 222300 3119361 ~ 3126781 (+)
CI01000021_03101146_03115161 RYBPA coding upstream 233613 3100953 ~ 3115468 (+)
CI01000021_03044076_03086657 NA coding upstream 262424 3044076 ~ 3086657 (+)
CI01000021_02930718_02985342 CNTN3A.2 coding upstream 363739 2930718 ~ 2985342 (+)
CI01000021_03382666_03386768 S1, KRT8, E3, KRT4 coding downstream 29589 3380769 ~ 3386900 (+)
CI01000021_03428718_03432817 NA coding downstream 77396 3428576 ~ 3433102 (+)
CI01000021_03510302_03551418 PLXNB1A coding downstream 159068 3510248 ~ 3551572 (+)
CI01000021_03562381_03570309 NA coding downstream 211107 3562287 ~ 3571272 (+)
CI01000021_03594629_03615777 PRKCBP1L coding downstream 243449 3594629 ~ 3616329 (+)
G117202 NA non-coding upstream 24211 3269144 ~ 3328233 (+)
G117211 NA non-coding upstream 25709 3320597 ~ 3323372 (+)
G117239 NA non-coding upstream 49800 3239335 ~ 3299281 (+)
G117260 NA non-coding upstream 55194 3293266 ~ 3293887 (+)
G117182 NA non-coding upstream 324848 3024032 ~ 3024233 (+)
G117303 NA non-coding downstream 17134 3368314 ~ 3368525 (+)
G117306 NA non-coding downstream 23866 3375046 ~ 3375311 (+)
G117308 NA non-coding downstream 25542 3376722 ~ 3376972 (+)
G117346 NA non-coding downstream 60718 3411898 ~ 3417615 (+)
G117327 NA non-coding downstream 100035 3451215 ~ 3478399 (+)
G117237 NA other upstream 105717 3237854 ~ 3243364 (+)
G116236 NA other upstream 1051886 2289817 ~ 2297195 (+)
CI01000021_01332646_01333910 NA other upstream 2014672 1331665 ~ 1333951 (+)
G115519 NA other upstream 2865117 480530 ~ 483964 (+)
G117484 NA other downstream 604966 3956146 ~ 3957752 (+)
G117493 NA other downstream 681820 4033000 ~ 4035676 (+)
CI01000021_04886787_04893309 PLAGL2 other downstream 1491553 4886337 ~ 4893474 (+)
G119701 NA other downstream 3448964 6800144 ~ 6860606 (+)

Expression


Co-expression Network