CI01000021_04087145_04091630


Basic Information

Item Value
gene id CI01000021_04087145_04091630
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000021
NCBI id null
chromosome length 7014339
location 4085974 ~ 4091826 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000021_04087145_04091630.mRNA
ATATATAAACCTGAGCGCAGTAAATCCCTCTATGCCAGCAGACAGATGACAAAGTGTCCATCCCTCCTGGAAAGTCTATACAAGCACACACCTGCACAGCTCCACGAATAACAACATTACGCTCTTACTCCAAACCACATGCTTCTTCCTTCACTGTCTCTCTGCAAATCTATTCTGTCCTTTAGTTTCTGACAAAGTAATGACTGTCATTCATCTCTAACAGTATATTGATATGTCTCTGTCTTAAGTATACTTCAAGTTCATTTTATTAAGTATACAAAGTTCAAGTATATTGTAAGTATACTTTTTGTAGTAAGTATACTAATTTCAGTGCACTAGTAGTATACTTGTAAGTGTACTATTTCAATCAGTGGTGCGCATTGATGTTTTAAAATTTTTTTTTTTTTTTTACATTTGTATATCAAATATAAATTCATGCCCCTATACTTAATGTTTTCACTTTTTCCTATTTAAACATTACATAAAGACTAAATACAATTTTACTATTTTGTATTTTTACAGTATGTAATTAATGTTCTATTGATTAAAACCAAGTACAAATCTCATCAAGTTGATGTTTTTTGTGCATTTTTACATTTATTCCAAAATAATATCTAAAGGCAGTAACAATTTAAGCAATATATTTTATTTGTGAACTGATGTTCAGCTGTTTTTTAATAGTCAAATTATGTTCATCAGTCATCAAGCTCAGTATACACTGGTCACAGACATGAAAATGTAAGCTACTTTTATTTTCGTCAAGCTGATTGCTCACTAAAAACCCCCACAGTCATCATGTTTTCAGGCCATTTCAAGTTTGATTTTCACATGACAAAGCAGTGATATCTAAGTGAGTGAGTTGTTTACTTACTTTTTATTTAGTCTTCCCATTAAAGGGTTAGTTCACTTTCAAATGAAAATTAGCCCAAGCTTTACTCACTCTCAAACCATCCTAGGTGTATATGACTTACTTCTTTCTGATGAATACAATCTGAGTTATATTAATAAATATCCTGACGCATCCGAGCTTTATAATGACAGTGAGCAATACCTACAAGTATGAGCTCTGTCATGGAACACACCGTGTAAAGAAGATGAGAGATGCAGGATACAAATAACATTAAAGTTTACTTAATGAATAACAGGTAACAAACAGCATAACCCACAGAGGATGAACAGAACGGGGAGTATAAATACACAGAGTGATGAGGAAGCTAAACAGGCACAGTTGTCGCTTGGATGTTTGAGAAAACGGAACAAAGACCAACTTCGTGAAACAATCCCACTCAAGCCCACAATCTGTCCATCTATGCCTTCTCTCACGCTGCTCGCCTGCCAATCAAAAACACTGATCATTATCGCCATGGAGACAGAAGGCTTGGTGACGTCATCAAACAAGCTTTCAGAACAGCATGTTATCAGAAAGTCGCTCACTGGTGAAAAGAGTTTTCTTCACTTCTAAAGTTAACTTAACACTCTGTAGAGTCAAGGTCAAGTGACGGTTTGGCTTTAAAATGGTATGATTCTTTCTACTTATTAGTTTATCTAGTTCTCTCTCAGACAGAGCAAATCTTTCCAATTAGTGAGGCCAGTGGTCTGGAACAAAGAGACGCACAAAATGTCTTTACGGGATTAGCCACAGTGTTTTTCTTCCTTCA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000021_04087145_04091630.mRNA True 1658 mRNA 0.35 2 4085974 4091826

Neighbor

gene id symbol gene type direction distance location
CI01000021_03793387_03846383 NA coding upstream 239591 3793387 ~ 3846383 (+)
CI01000021_03640760_03747887 LAMA5 coding upstream 338087 3640760 ~ 3747887 (+)
CI01000021_03617827_03624592 MAPRE1B, MAPRE1 coding upstream 461070 3617827 ~ 3624904 (+)
CI01000021_03594629_03615777 PRKCBP1L coding upstream 469645 3594629 ~ 3616329 (+)
CI01000021_03562381_03570309 NA coding upstream 514702 3562287 ~ 3571272 (+)
CI01000021_04219242_04237829 NA coding downstream 127361 4219187 ~ 4238007 (+)
CI01000021_04259458_04263656 NA coding downstream 167331 4259157 ~ 4264106 (+)
CI01000021_04436103_04476829 OPRL1 coding downstream 344001 4435827 ~ 4477311 (+)
CI01000021_04576127_04585164 NA coding downstream 484301 4576127 ~ 4585311 (+)
CI01000021_04614553_04621970 NA coding downstream 521939 4613765 ~ 4622428 (+)
G117492 NA non-coding upstream 84851 3999023 ~ 4001123 (+)
G117471 NA non-coding upstream 154284 3927839 ~ 3931690 (+)
G117431 NA non-coding upstream 159373 3914686 ~ 3926601 (+)
G117329 NA non-coding upstream 399705 3684236 ~ 3686269 (+)
G117366 NA non-coding upstream 548592 3536369 ~ 3537382 (+)
G117556 NA non-coding downstream 52675 4144501 ~ 4144835 (+)
G117564 NA non-coding downstream 71509 4163335 ~ 4163560 (+)
G117566 NA non-coding downstream 72509 4164335 ~ 4164600 (+)
G117568 NA non-coding downstream 79140 4170966 ~ 4171179 (+)
G117580 NA non-coding downstream 112089 4203915 ~ 4204151 (+)
G117493 NA other upstream 50298 4033000 ~ 4035676 (+)
G117484 NA other upstream 128222 3956146 ~ 3957752 (+)
G117202 NA other upstream 757741 3269144 ~ 3328233 (+)
G117237 NA other upstream 842610 3237854 ~ 3243364 (+)
G116236 NA other upstream 1788779 2289817 ~ 2297195 (+)
CI01000021_04886787_04893309 PLAGL2 other downstream 750907 4886337 ~ 4893474 (+)
G119701 NA other downstream 2708318 6800144 ~ 6860606 (+)

Expression


Co-expression Network